C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sarcalumenin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185739 SRL 9606 - 16:4189374-4242080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399609 SRL-001 4189374-4242080 protein_coding
  ENST00000537996 SRL-004 4191810-4239743 protein_coding
  ENST00000572111 SRL-002 4189374-4242075 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399609ENST00000537996ENST00000572111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399609 0.592±0.00 0.992±0.00 N/A 0.326±0.21 3.431±3.41 0.691±0.64 73.025±54.35 1.433±0.00 0.103±0.00 0.502±0.21 62.407±31.29 0.480±0.31 0.772±0.11 7.114±0.00
ENST00000537996 N/A N/A N/A N/A 0.362±0.00 N/A N/A N/A N/A 0.834±0.00 N/A N/A N/A N/A
ENST00000572111 N/A N/A 0.080±0.00 0.052±0.00 N/A 0.185±0.00 3.112±0.00 N/A 0.331±0.00 N/A 5.698±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OD CIL_0000OD_0001 CGP 16:3953387-4242080
CIL_00032P CIL_00032P_0001 CGP 16:4189374-4273075

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0016529 IEA sarcoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018306 srl sarcalumenin protein_coding Danio_rerio
ENSMUSG00000022519 Srl sarcalumenin protein_coding Mus_musculus

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