C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sarcalumenin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399609 SRL-001 ENSG00000185739 9606 - 16:4189374-4242080 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399609
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399609 0.592±0.00 0.992±0.00 0.326±0.21 3.431±3.41 0.691±0.64 73.025±54.35 1.433±0.00 0.103±0.00 0.502±0.21 62.407±31.29 0.480±0.31 0.772±0.11 7.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OD CIL_0000OD_0001 CGP 16:3953387-4242080
CIL_00032P CIL_00032P_0001 CGP 16:4189374-4273075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0016529 IEA sarcoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090500 Srl-002 protein_coding Mus_musculus 0 1934
ENSMUST00000023161 Srl-001 protein_coding Mus_musculus 0 1862

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