C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162104-ENSG00000185739 CGP 9606 16:3953387-4242080
GeneTranscriptPositionBiotype
ENSG00000162104 (ADCY9)
adenylate cyclase 9 		ENST00000294016 (ADCY9-001) 3962651-4116185 protein_coding
ENST00000571467 (ADCY9-004) 3989084-4113925 nonsense_mediated_decay
ENST00000571889 (ADCY9-005) 3989089-4054190 processed_transcript
ENST00000572288 (ADCY9-003) 3992222-4114026 protein_coding
ENST00000574721 (ADCY9-002) 3981773-3984150 retained_intron
ENST00000575550 (ADCY9-006) 3983392-4015682 processed_transcript
ENST00000576936 (ADCY9-007) 3953387-3989000 protein_coding
ENSG00000185739 (SRL)
sarcalumenin 		ENST00000399609 (SRL-001) 4189374-4242080 protein_coding
ENST00000537996 (SRL-004) 4191810-4239743 protein_coding
ENST00000572111 (SRL-002) 4189374-4242075 nonsense_mediated_decay
ENSG00000262471 (RP11-95P2.4)
 ENST00000572673 (RP11-95P2.4-001) 4130555-4130820 processed_pseudogene
ENSG00000263105 (RP11-95P2.3)
 ENST00000573220 (RP11-95P2.3-001) 4180117-4183515 lincRNA
ENSG00000263159 (RP11-462G12.4)
 ENST00000571169 (RP11-462G12.4-001) 4032012-4032936 antisense
CIL_0000OD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005580-ENSMUSG00000022519 CGP 10090 16:4287529-4541816
GeneTranscriptPositionBiotype
ENSMUSG00000005580 (Adcy9)
adenylate cyclase 9 		ENSMUST00000005719 (Adcy9-201) 4287545-4419587 protein_coding
ENSMUST00000117801 (Adcy9-001) 4287529-4419808 protein_coding
ENSMUST00000120080 (Adcy9-002) 4287529-4420498 protein_coding
ENSMUSG00000022519 (Srl)
sarcalumenin 		ENSMUST00000023161 (Srl-001) 4480228-4523075 protein_coding
ENSMUST00000090500 (Srl-002) 4480216-4523075 protein_coding
ENSMUST00000132284 (Srl-003) 4493603-4523063 retained_intron
ENSMUST00000133440 (Srl-004) 4487579-4541816 processed_transcript
ENSMUSG00000083585 (Gm15885)
predicted gene 15885 		ENSMUST00000122114 (Gm15885-001) 4539308-4539695 processed_pseudogene
ENSMUSG00000084304 (Gm6142)
predicted pseudogene 6142 		ENSMUST00000120290 (Gm6142-001) 4320356-4320680 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OD_0001ENSG00000162104ENST00000294016ENST00000571467ENST00000571889ENST00000572288ENST00000574721ENST00000575550ENST00000576936ENSG00000185739ENST00000399609ENST00000537996ENST00000572111ENSG00000262471ENST00000572673ENSG00000263105ENST00000573220ENSG00000263159ENST00000571169CIL_0000OD_0002ENSMUSG00000005580ENSMUST00000005719ENSMUST00000117801ENSMUST00000120080ENSMUSG00000022519ENSMUST00000023161ENSMUST00000090500ENSMUST00000132284ENSMUST00000133440ENSMUSG00000083585ENSMUST00000122114ENSMUSG00000084304ENSMUST00000120290
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OD_0001ENSG00000162104ENST00000294016ENSG00000185739ENST00000399609ENST00000537996ENST00000572111ENSG00000262471ENST00000572673ENSG00000263105ENST00000573220ENSG00000263159ENST00000571169CIL_0000OD_0002ENSMUSG00000005580ENSMUST00000005719ENSMUST00000117801ENSMUST00000120080ENSMUSG00000022519ENSMUST00000023161ENSMUST00000090500ENSMUST00000133440ENSMUSG00000083585ENSMUST00000122114ENSMUSG00000084304ENSMUST00000120290
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162104 ENST00000294016 5.753±0.00 2.833±0.00 2.844±0.00 2.374±0.68 2.147±0.47 6.777±0.00 6.813±4.38 3.464±0.22 2.662±0.02 4.748±2.72 16.713±8.96 5.774±4.30 3.593±1.12 1.880±0.21
ENST00000571467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185739 ENST00000399609 0.592±0.00 0.992±0.00 N/A 0.326±0.21 3.431±3.41 0.691±0.64 73.025±54.35 1.433±0.00 0.103±0.00 0.502±0.21 62.407±31.29 0.480±0.31 0.772±0.11 7.114±0.00
ENST00000537996 N/A N/A N/A N/A 0.362±0.00 N/A N/A N/A N/A 0.834±0.00 N/A N/A N/A N/A
ENST00000572111 N/A N/A 0.080±0.00 0.052±0.00 N/A 0.185±0.00 3.112±0.00 N/A 0.331±0.00 N/A 5.698±0.00 N/A N/A N/A
ENSG00000262471 ENST00000572673 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.233±0.00 N/A N/A N/A N/A
ENSG00000263105 ENST00000573220 0.063±0.00 N/A N/A N/A 0.366±0.00 N/A 0.254±0.00 0.367±0.00 0.372±0.00 0.288±0.00 N/A N/A N/A 0.533±0.16
ENSG00000263159 ENST00000571169 0.244±0.00 0.504±0.00 N/A 0.473±0.00 0.522±0.00 0.240±0.00 N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005580 ENSMUST00000005719 2.387±0.37 7.861±2.53 N/A N/A 2.623±0.59 3.367±1.48 N/A 0.802±0.00 2.288±2.10 N/A N/A 8.314±3.30 1.335±0.63 0.492±0.12
ENSMUST00000117801 1.704±0.00 14.340±6.26 N/A 1.865±0.75 3.022±0.12 1.476±0.42 N/A 2.741±0.56 2.663±2.30 8.372±0.00 N/A 6.620±3.74 1.846±0.80 0.877±0.23
ENSMUST00000120080 1.732±0.49 16.626±1.73 N/A 0.717±0.00 2.847±0.23 1.997±0.54 N/A 1.096±0.00 2.263±0.41 2.522±0.00 N/A 7.866±2.08 0.705±0.16 0.524±0.10
ENSMUSG00000022519 ENSMUST00000023161 N/A N/A N/A 0.077±0.00 7.224±0.67 0.132±0.00 17.522±3.09 0.540±0.24 0.047±0.02 1.381±0.07 128.959±6.70 0.230±0.00 N/A 0.049±0.00
ENSMUST00000090500 N/A 0.595±0.18 2.981±0.25 3.041±0.12 8.151±8.73 0.640±0.08 34.614±6.88 1.182±0.16 0.342±0.20 1.257±0.40 147.364±49.50 1.861±0.40 0.357±0.04 0.536±0.18
ENSMUST00000132284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133440 N/A N/A N/A N/A N/A 0.845±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083585 ENSMUST00000122114 N/A N/A N/A N/A 0.290±0.08 N/A N/A N/A 0.158±0.04 0.188±0.00 N/A 0.432±0.26 0.115±0.03 N/A
ENSMUSG00000084304 ENSMUST00000120290 N/A N/A 0.100±0.00 0.127±0.07 N/A N/A N/A N/A 0.048±0.01 N/A 0.276±0.07 1.987±0.50 0.400±0.33 0.318±0.06

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