C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sarcalumenin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572111 SRL-002 ENSG00000185739 9606 - 16:4189374-4242075 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverMuscleENST00000572111
Transcript ID Bladder Brain Colon Heart Liver Muscle
ENST00000572111 0.080±0.00 0.052±0.00 0.185±0.00 3.112±0.00 0.331±0.00 5.698±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OD CIL_0000OD_0001 CGP 16:3953387-4242080
CIL_00032P CIL_00032P_0001 CGP 16:4189374-4273075

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023161 Srl-001 protein_coding Mus_musculus 0 1882
ENSMUST00000090500 Srl-002 protein_coding Mus_musculus 0 1858

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