C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: importin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196497 IPO4 9606 - 14:24180219-24188964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354464 IPO4-001 24180219-24188964 protein_coding
  ENST00000557996 IPO4-023 24188102-24188797 retained_intron
  ENST00000558046 IPO4-009 24180226-24188797 nonsense_mediated_decay
  ENST00000558193 IPO4-021 24187553-24188821 retained_intron
  ENST00000558233 IPO4-013 24180364-24183272 protein_coding
  ENST00000558718 IPO4-016 24187531-24188797 retained_intron
  ENST00000558780 IPO4-004 24180220-24188822 nonsense_mediated_decay
  ENST00000559253 IPO4-018 24187087-24188844 nonsense_mediated_decay
  ENST00000559588 IPO4-002 24180305-24188869 retained_intron
  ENST00000559635 IPO4-017 24187491-24188069 retained_intron
  ENST00000560155 IPO4-003 24180305-24188869 nonsense_mediated_decay
  ENST00000560222 IPO4-022 24188159-24188811 retained_intron
  ENST00000560315 IPO4-020 24187946-24188797 retained_intron
  ENST00000560798 IPO4-011 24180220-24188797 retained_intron
  ENST00000560935 IPO4-015 24182817-24183650 retained_intron
  ENST00000561034 IPO4-019 24188005-24188822 nonsense_mediated_decay
  ENST00000561090 IPO4-010 24180219-24188822 retained_intron
  ENST00000561199 IPO4-008 24180442-24188797 retained_intron
  ENST00000561379 IPO4-014 24182536-24183472 retained_intron
  ENST00000561462 IPO4-012 24180220-24184675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000558046ENST00000560155ENST00000561090
Transcript ID Muscle Testis
ENST00000558046 24.659±0.00 112.814±48.19
ENST00000560155 15.936±0.00 N/A
ENST00000561090 4.142±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CI CIL_0001CI_0001 CGP 14:24161053-24180257
CIL_00028R CIL_00028R_0001 CGP 14:24171853-24188964

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005643 NAS nuclear pore
GO:0005737 IEA cytoplasm
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0015031 NAS protein transport
GO:0016020 IDA membrane
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041493 ipo4 importin 4 protein_coding Danio_rerio
ENSMUSG00000002319 Ipo4 importin 4 protein_coding Mus_musculus

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