C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: importin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560155 IPO4-003 ENSG00000196497 9606 - 14:24180305-24188869 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000560155
Transcript ID Muscle
ENST00000560155 15.936±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CI CIL_0001CI_0001 CGP 14:24161053-24180257
CIL_00028R CIL_00028R_0001 CGP 14:24171853-24188964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156420 Ipo4-013 processed_transcript Mus_musculus 0 2887
ENSMUST00000047131 Ipo4-001 protein_coding Mus_musculus 0 2880
ENSMUST00000135221 Ipo4-002 nonsense_mediated_decay Mus_musculus 0 2206
ENSMUST00000148351 Ipo4-003 nonsense_mediated_decay Mus_musculus 0 1881
ENSMUST00000125133 Ipo4-004 retained_intron Mus_musculus 0 401
ENSMUST00000148942 Ipo4-005 retained_intron Mus_musculus 0 370
ENSMUST00000150951 Ipo4-006 retained_intron Mus_musculus 0 335

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