C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: importin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354464 IPO4-001 ENSG00000196497 9606 - 14:24180219-24188964 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CI CIL_0001CI_0001 CGP 14:24161053-24180257
CIL_00028R CIL_00028R_0001 CGP 14:24171853-24188964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005643 NAS nuclear pore
GO:0005737 IEA cytoplasm
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0015031 NAS protein transport
GO:0016020 IDA membrane
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156420 Ipo4-013 processed_transcript Mus_musculus 0 2963
ENSMUST00000047131 Ipo4-001 protein_coding Mus_musculus 0 2955
ENSMUST00000135221 Ipo4-002 nonsense_mediated_decay Mus_musculus 0 2206
ENSMUST00000148351 Ipo4-003 nonsense_mediated_decay Mus_musculus 0 1881
ENSMUST00000125133 Ipo4-004 retained_intron Mus_musculus 0 401
ENSMUST00000148942 Ipo4-005 retained_intron Mus_musculus 0 370
ENSMUST00000150951 Ipo4-006 retained_intron Mus_musculus 0 335

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