C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfatase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196562 SULF2 9606 - 20:47656348-47786616 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359930 SULF2-001 47656912-47786586 protein_coding
  ENST00000433632 SULF2-003 47661434-47663554 processed_transcript
  ENST00000437955 SULF2-002 47702519-47785489 protein_coding
  ENST00000463221 SULF2-008 47689548-47786054 retained_intron
  ENST00000465769 SULF2-013 47672195-47676692 retained_intron
  ENST00000467815 SULF2-015 47657668-47786554 protein_coding
  ENST00000474450 SULF2-014 47684514-47757331 processed_transcript
  ENST00000478766 SULF2-010 47706513-47736943 processed_transcript
  ENST00000479472 SULF2-011 47656348-47657567 processed_transcript
  ENST00000479970 SULF2-004 47657406-47659730 retained_intron
  ENST00000484875 SULF2-005 47657406-47786616 protein_coding
  ENST00000495544 SULF2-007 47657435-47665259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000467815ENST00000484875ENST00000495544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000467815 24.431±0.00 33.870±0.00 N/A 11.078±0.00 11.510±0.00 6.502±0.00 7.735±5.75 12.307±0.00 24.129±15.97 11.105±4.45 14.569±0.00
ENST00000484875 N/A N/A 2.445±0.00 N/A N/A N/A N/A N/A 34.777±12.68 13.925±4.17 N/A
ENST00000495544 N/A 30.638±0.00 N/A N/A 6.707±0.00 N/A 11.290±0.00 8.834±0.00 24.146±5.78 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NW CIL_0008NW_0001 VISTA 20:47083832-47684912
CIL_0006IW CIL_0006IW_0002 CGP 20:47209214-47656877
CIL_0001Y0 CIL_0001Y0_0001 CGP 20:47501902-47786616
CIL_00025A CIL_00025A_0001 CGP 20:47656348-48827883

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 ISS kidney development
GO:0002063 ISS chondrocyte development
GO:0003094 ISS glomerular filtration
GO:0003824 IEA catalytic activity
GO:0004065 IDA arylsulfatase activity
GO:0005509 IEA calcium ion binding
GO:0005615 NAS extracellular space
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0008152 IEA metabolic process
GO:0008449 IDA N-acetylglucosamine-6-sulfatase activity
GO:0008484 IEA sulfuric ester hydrolase activity
GO:0009986 IDA:IEA cell surface
GO:0010575 ISS positive regulation vascular endothelial growth factor production
GO:0014846 ISS esophagus smooth muscle contraction
GO:0030177 IDA positive regulation of Wnt signaling pathway
GO:0030201 NAS heparan sulfate proteoglycan metabolic process
GO:0032836 ISS glomerular basement membrane development
GO:0035860 ISS glial cell-derived neurotrophic factor receptor signaling pathway
GO:0040037 ISS negative regulation of fibroblast growth factor receptor signaling pathway
GO:0048706 ISS embryonic skeletal system development
GO:0051216 ISS cartilage development
GO:0060348 ISS bone development
GO:0060384 ISS innervation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000006800 Sulf2 sulfatase 2 protein_coding Mus_musculus

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