C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfatase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006800 Sulf2 10090 - 2:166073089-166155663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088086 Sulf2-004 166073920-166155285 protein_coding
  ENSMUST00000109249 Sulf2-001 166073089-166155663 protein_coding
  ENSMUST00000125503 Sulf2-007 166074670-166076018 retained_intron
  ENSMUST00000133395 Sulf2-005 166132593-166154423 processed_transcript
  ENSMUST00000139266 Sulf2-006 166093516-166154806 processed_transcript
  ENSMUST00000143996 Sulf2-003 166074815-166078119 processed_transcript
  ENSMUST00000146497 Sulf2-002 166074150-166155605 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088086ENSMUST00000109249ENSMUST00000146497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088086 26.716±4.61 14.219±7.13 20.571±1.10 15.820±3.43 13.287±4.49 7.824±0.00 6.489±1.52 5.553±1.30 3.462±1.68 9.201±3.55 1.512±0.32 78.041±30.86 27.025±15.74 2.018±0.14
ENSMUST00000109249 9.377±0.00 8.478±4.05 N/A N/A 12.401±1.06 6.913±0.87 N/A N/A 2.495±0.00 7.378±0.65 N/A 55.130±13.89 N/A N/A
ENSMUST00000146497 N/A N/A N/A 26.274±0.00 N/A N/A N/A N/A N/A N/A N/A 140.159±0.00 49.528±7.80 3.470±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NW CIL_0008NW_0002 VISTA 2:165614396-166214787
CIL_0006IW CIL_0006IW_0003 CGP 2:165784152-166073242
CIL_0001Y0 CIL_0001Y0_0002 CGP 2:165992636-166155663
CIL_0008NU CIL_0008NU_0002 VISTA 2:166052865-166654821
CIL_00025A CIL_00025A_0002 CGP 2:166073089-166713832

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 IGI kidney development
GO:0002063 IMP chondrocyte development
GO:0003094 IGI glomerular filtration
GO:0004065 ISS arylsulfatase activity
GO:0005509 IEA calcium ion binding
GO:0005615 ISO extracellular space
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006790 ISO sulfur compound metabolic process
GO:0008449 ISO N-acetylglucosamine-6-sulfatase activity
GO:0009986 ISS cell surface
GO:0010575 IGI positive regulation vascular endothelial growth factor production
GO:0014846 IGI esophagus smooth muscle contraction
GO:0030177 IEA positive regulation of Wnt signaling pathway
GO:0030201 IMP heparan sulfate proteoglycan metabolic process
GO:0032836 IGI glomerular basement membrane development
GO:0035860 IDA glial cell-derived neurotrophic factor receptor signaling pathway
GO:0040037 IGI negative regulation of fibroblast growth factor receptor signaling pathway
GO:0048706 IGI embryonic skeletal system development
GO:0051216 IMP cartilage development
GO:0060348 IGI bone development
GO:0060384 IGI innervation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196562 SULF2 sulfatase 2 protein_coding Homo_sapiens

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