C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sulfatase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467815 SULF2-015 ENSG00000196562 9606 - 20:47657668-47786554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000467815
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000467815 24.431±0.00 33.870±0.00 11.078±0.00 11.510±0.00 6.502±0.00 7.735±5.75 12.307±0.00 24.129±15.97 11.105±4.45 14.569±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NW CIL_0008NW_0001 VISTA 20:47083832-47684912
CIL_0006IW CIL_0006IW_0002 CGP 20:47209214-47656877
CIL_0001Y0 CIL_0001Y0_0001 CGP 20:47501902-47786616
CIL_00025A CIL_00025A_0001 CGP 20:47656348-48827883

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 ISS kidney development
GO:0002063 ISS chondrocyte development
GO:0003094 ISS glomerular filtration
GO:0003824 IEA catalytic activity
GO:0004065 IDA arylsulfatase activity
GO:0005509 IEA calcium ion binding
GO:0005615 NAS extracellular space
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0008152 IEA metabolic process
GO:0008449 IDA N-acetylglucosamine-6-sulfatase activity
GO:0008484 IEA sulfuric ester hydrolase activity
GO:0009986 IDA:IEA cell surface
GO:0010575 ISS positive regulation vascular endothelial growth factor production
GO:0014846 ISS esophagus smooth muscle contraction
GO:0030177 IDA positive regulation of Wnt signaling pathway
GO:0030201 NAS heparan sulfate proteoglycan metabolic process
GO:0032836 ISS glomerular basement membrane development
GO:0035860 ISS glial cell-derived neurotrophic factor receptor signaling pathway
GO:0040037 ISS negative regulation of fibroblast growth factor receptor signaling pathway
GO:0048706 ISS embryonic skeletal system development
GO:0051216 ISS cartilage development
GO:0060348 ISS bone development
GO:0060384 ISS innervation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088086 Sulf2-004 protein_coding Mus_musculus 0 2981
ENSMUST00000109249 Sulf2-001 protein_coding Mus_musculus 0 2981
ENSMUST00000146497 Sulf2-002 processed_transcript Mus_musculus 0 1221
ENSMUST00000139266 Sulf2-006 processed_transcript Mus_musculus 0 804
ENSDART00000056080 sulf1-202 protein_coding Danio_rerio 0 601
ENSDART00000027022 sulf1-201 protein_coding Danio_rerio 0 601
ENSDART00000142830 sulf1-003 protein_coding Danio_rerio 0 601
ENSDART00000140379 sulf1-002 protein_coding Danio_rerio 0 601
ENSDART00000056081 sulf1-001 protein_coding Danio_rerio 0 601
ENSDART00000035865 sulf2b-001 protein_coding Danio_rerio 0 492
ENSDART00000104904 sulf2b-201 protein_coding Danio_rerio 0 453
ENSDART00000139135 sulf2b-002 protein_coding Danio_rerio 0 453
ENSMUST00000143996 Sulf2-003 processed_transcript Mus_musculus 0 252
ENSMUST00000125503 Sulf2-007 retained_intron Mus_musculus 4.99997e-41 174
ENSDART00000137175 sulf1-004 protein_coding Danio_rerio 2e-40 172

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