C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001Y0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124151-ENSG00000196562 CGP 9606 20:47501902-47786616
GeneTranscriptPositionBiotype
ENSG00000124151 (NCOA3)
nuclear receptor coactivator 3
ENST00000371997 (NCOA3-002) 47501941-47655742 protein_coding
ENST00000371998 (NCOA3-003) 47501927-47653619 protein_coding
ENST00000372004 (NCOA3-001) 47501902-47656877 protein_coding
ENST00000490248 (NCOA3-004) 47622958-47624073 processed_transcript
ENST00000497292 (NCOA3-005) 47627002-47628790 processed_transcript
ENSG00000221294 (AL021394.1)
ENST00000408367 (AL021394.1-201) 47570935-47571015 miRNA
ENSG00000229853 (RP5-1049G16.4)
ENST00000448675 (RP5-1049G16.4-001) 47630266-47631438 processed_pseudogene
CIL_0001Y0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027678-ENSMUSG00000006800 CGP 10090 2:165992636-166155663
GeneTranscriptPositionBiotype
ENSMUSG00000006800 (Sulf2)
sulfatase 2
ENSMUST00000088086 (Sulf2-004) 166073920-166155285 protein_coding
ENSMUST00000109249 (Sulf2-001) 166073089-166155663 protein_coding
ENSMUST00000125503 (Sulf2-007) 166074670-166076018 retained_intron
ENSMUST00000133395 (Sulf2-005) 166132593-166154423 processed_transcript
ENSMUST00000139266 (Sulf2-006) 166093516-166154806 processed_transcript
ENSMUST00000143996 (Sulf2-003) 166074815-166078119 processed_transcript
ENSMUST00000146497 (Sulf2-002) 166074150-166155605 processed_transcript
ENSMUSG00000027678 (Ncoa3)
nuclear receptor coactivator 3
ENSMUST00000088095 (Ncoa3-201) 165992637-166073242 protein_coding
ENSMUST00000109252 (Ncoa3-001) 165992636-166071470 protein_coding
ENSMUST00000139394 (Ncoa3-004) 166067430-166070200 retained_intron
ENSMUST00000139658 (Ncoa3-003) 166060820-166066202 retained_intron
ENSMUST00000153507 (Ncoa3-002) 166047918-166052398 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y0_0001ENSG00000124151ENST00000371997ENST00000371998ENST00000372004ENST00000490248ENST00000497292ENSG00000221294ENST00000408367ENSG00000229853ENST00000448675CIL_0001Y0_0002ENSMUSG00000006800ENSMUST00000088086ENSMUST00000109249ENSMUST00000125503ENSMUST00000133395ENSMUST00000139266ENSMUST00000143996ENSMUST00000146497ENSMUSG00000027678ENSMUST00000088095ENSMUST00000109252ENSMUST00000139394ENSMUST00000139658ENSMUST00000153507
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y0_0001ENSG00000124151ENST00000371997ENST00000371998ENST00000372004ENSG00000221294ENST00000408367ENSG00000229853ENST00000448675CIL_0001Y0_0002ENSMUSG00000006800ENSMUST00000088086ENSMUST00000109249ENSMUST00000146497ENSMUSG00000027678ENSMUST00000088095ENSMUST00000109252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124151 ENST00000371997 N/A N/A 2.056±0.00 0.896±0.00 N/A N/A N/A N/A 1.822±0.00 N/A N/A 3.563±0.00 N/A N/A
ENST00000371998 N/A N/A N/A N/A 3.599±0.00 3.736±0.00 1.974±0.00 1.818±0.00 4.412±0.00 7.559±0.00 2.324±1.61 5.364±0.00 N/A N/A
ENST00000372004 N/A 10.023±0.00 N/A 3.215±0.00 4.861±0.00 4.829±1.84 3.397±2.03 2.454±0.00 3.205±1.21 5.260±1.18 6.149±0.00 5.252±0.90 7.021±3.65 4.989±1.27
ENST00000490248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221294 ENST00000408367 0.319±0.00 N/A N/A N/A N/A 0.311±0.00 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000229853 ENST00000448675 0.073±0.00 N/A N/A N/A 0.058±0.00 0.206±0.13 0.037±0.01 N/A 0.042±0.00 0.041±0.00 N/A 0.032±0.01 N/A 0.033±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006800 ENSMUST00000088086 26.716±4.61 14.219±7.13 20.571±1.10 15.820±3.43 13.287±4.49 7.824±0.00 6.489±1.52 5.553±1.30 3.462±1.68 9.201±3.55 1.512±0.32 78.041±30.86 27.025±15.74 2.018±0.14
ENSMUST00000109249 9.377±0.00 8.478±4.05 N/A N/A 12.401±1.06 6.913±0.87 N/A N/A 2.495±0.00 7.378±0.65 N/A 55.130±13.89 N/A N/A
ENSMUST00000125503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146497 N/A N/A N/A 26.274±0.00 N/A N/A N/A N/A N/A N/A N/A 140.159±0.00 49.528±7.80 3.470±0.00
ENSMUSG00000027678 ENSMUST00000088095 10.442±1.62 7.396±3.11 7.931±3.69 5.486±2.09 7.841±4.35 8.070±2.59 4.851±2.32 4.805±0.97 2.101±1.05 6.581±0.17 1.713±0.85 14.666±5.42 5.282±2.83 2.559±0.31
ENSMUST00000109252 N/A 5.003±0.42 7.570±0.00 N/A 7.389±1.94 6.324±1.24 4.320±0.00 7.161±1.17 2.625±1.04 7.669±0.89 0.796±0.10 N/A 6.162±4.04 3.184±1.22
ENSMUST00000139394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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