C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5',3'-nucleotidase, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205309 NT5M 9606 + 17:17303335-17347663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389022 NT5M-007 17303335-17347661 protein_coding
  ENST00000470418 NT5M-004 17303390-17346858 nonsense_mediated_decay
  ENST00000478373 NT5M-002 17303366-17344866 nonsense_mediated_decay
  ENST00000480529 NT5M-005 17345269-17347152 processed_transcript
  ENST00000483704 NT5M-003 17303678-17347663 nonsense_mediated_decay
  ENST00000582909 NT5M-006 17333511-17347208 processed_transcript
  ENST00000616989 NT5M-201 17303335-17347661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389022ENST00000470418ENST00000478373ENST00000480529ENST00000483704ENST00000582909ENST00000616989
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389022 N/A 1.353±0.00 1.354±0.60 0.563±0.00 2.340±0.00 2.131±0.00 0.944±0.00 0.143±0.00 N/A 1.916±0.00 1.030±0.00 1.293±0.44 5.379±2.58
ENST00000470418 N/A N/A 0.807±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478373 N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A N/A 0.814±0.00 N/A N/A N/A
ENST00000480529 N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A
ENST00000483704 0.164±0.00 N/A 1.032±0.00 N/A N/A 0.133±0.00 0.227±0.00 0.106±0.00 0.837±0.00 N/A 0.246±0.04 0.367±0.00 2.476±0.13
ENST00000582909 0.551±0.00 N/A N/A N/A N/A N/A 0.979±0.00 N/A N/A N/A 0.473±0.00 N/A N/A
ENST00000616989 0.617±0.00 N/A N/A 1.305±0.00 N/A N/A N/A N/A N/A 1.513±0.00 1.245±0.83 0.594±0.00 1.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NX CIL_0000NX_0001 CGP 17:17246820-17347663
CIL_0000NW CIL_0000NW_0001 CGP 17:17303335-17493226

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006260 TAS DNA replication
GO:0008252 TAS nucleotidase activity
GO:0008253 EXP:IEA 5'-nucleotidase activity
GO:0009223 TAS pyrimidine deoxyribonucleotide catabolic process
GO:0009264 IEA deoxyribonucleotide catabolic process
GO:0016311 IEA dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046079 IEA dUMP catabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032615 Nt5m 5',3'-nucleotidase, mitochondrial protein_coding Mus_musculus

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