C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: 5',3'-nucleotidase, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478373 NT5M-002 ENSG00000205309 9606 + 17:17303366-17344866 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENST00000478373
Transcript ID Colon Muscle
ENST00000478373 0.500±0.00 0.814±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NX CIL_0000NX_0001 CGP 17:17246820-17347663
CIL_0000NW CIL_0000NW_0001 CGP 17:17303335-17493226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008253 IEA 5'-nucleotidase activity
GO:0009264 IEA deoxyribonucleotide catabolic process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137695 Nt5m-004 processed_transcript Mus_musculus 0 340
ENSMUST00000154699 Nt5m-003 processed_transcript Mus_musculus 0 340
ENSMUST00000149076 Nt5m-002 processed_transcript Mus_musculus 0 340
ENSMUST00000102695 Nt5m-001 protein_coding Mus_musculus 0 339

Loading