C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5',3'-nucleotidase, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389022 NT5M-007 ENSG00000205309 9606 + 17:17303335-17347661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000389022
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000389022 1.353±0.00 1.354±0.60 0.563±0.00 2.340±0.00 2.131±0.00 0.944±0.00 0.143±0.00 1.916±0.00 1.030±0.00 1.293±0.44 5.379±2.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NX CIL_0000NX_0001 CGP 17:17246820-17347663
CIL_0000NW CIL_0000NW_0001 CGP 17:17303335-17493226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006260 TAS DNA replication
GO:0008252 TAS nucleotidase activity
GO:0008253 EXP:IEA 5'-nucleotidase activity
GO:0009223 TAS pyrimidine deoxyribonucleotide catabolic process
GO:0009264 IEA deoxyribonucleotide catabolic process
GO:0016311 IEA dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046079 IEA dUMP catabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102695 Nt5m-001 protein_coding Mus_musculus 0 787
ENSMUST00000137695 Nt5m-004 processed_transcript Mus_musculus 0 562
ENSMUST00000149076 Nt5m-002 processed_transcript Mus_musculus 0 562
ENSMUST00000154699 Nt5m-003 processed_transcript Mus_musculus 0 390

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