C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FGFR1 oncogene partner
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213066 FGFR1OP 9606 + 6:166999182-167052713 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349556 FGFR1OP-002 166999408-167040317 protein_coding
  ENST00000366847 FGFR1OP-001 166999182-167052713 protein_coding
  ENST00000476078 FGFR1OP-004 166999617-167004304 processed_transcript
  ENST00000488525 FGFR1OP-006 167024790-167033882 processed_transcript
  ENST00000494781 FGFR1OP-003 166999457-167011691 processed_transcript
  ENST00000496181 FGFR1OP-005 167022426-167025211 processed_transcript
  ENST00000622353 FGFR1OP-201 166999317-167042418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349556ENST00000366847ENST00000622353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349556 1.138±0.00 N/A 1.952±0.00 1.940±0.56 2.411±1.33 3.609±1.40 1.225±0.08 5.111±0.12 2.190±0.85 1.839±0.80 0.513±0.04 14.176±11.29 2.311±1.00 30.911±7.83
ENST00000366847 0.078±0.00 0.299±0.00 0.222±0.00 0.150±0.00 0.141±0.04 0.218±0.07 0.115±0.01 0.323±0.01 0.140±0.00 0.153±0.03 0.021±0.00 1.294±0.95 0.096±0.00 0.501±0.00
ENST00000622353 0.496±0.00 1.349±0.00 0.763±0.00 1.083±0.30 1.332±0.09 0.990±0.00 0.793±0.44 1.715±0.00 1.256±0.69 0.731±0.00 0.341±0.06 7.504±6.43 0.781±0.12 6.696±2.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0001 CGP 6:166929504-167052713
CIL_0002HA CIL_0002HA_0002 CGP 6:166999182-167139141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0004713 TAS protein tyrosine kinase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005813 IDA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005829 TAS cytosol
GO:0006469 IDA negative regulation of protein kinase activity
GO:0008284 IDA positive regulation of cell proliferation
GO:0018108 TAS peptidyl-tyrosine phosphorylation
GO:0019901 IPI protein kinase binding
GO:0030292 IDA protein tyrosine kinase inhibitor activity
GO:0030307 IDA positive regulation of cell growth
GO:0030335 IDA positive regulation of cell migration
GO:0034453 IEA microtubule anchoring
GO:0042803 IDA protein homodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061099 IDA negative regulation of protein tyrosine kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003058 fgfr1op FGFR1 oncogene partner protein_coding Danio_rerio
ENSMUSG00000069135 Fgfr1op Fgfr1 oncogene partner protein_coding Mus_musculus

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