C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FGFR1 oncogene partner
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366847 FGFR1OP-001 ENSG00000213066 9606 + 6:166999182-167052713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366847
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366847 0.078±0.00 0.299±0.00 0.222±0.00 0.150±0.00 0.141±0.04 0.218±0.07 0.115±0.01 0.323±0.01 0.140±0.00 0.153±0.03 0.021±0.00 1.294±0.95 0.096±0.00 0.501±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0001 CGP 6:166929504-167052713
CIL_0002HA CIL_0002HA_0002 CGP 6:166999182-167139141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0004713 TAS protein tyrosine kinase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005813 IDA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005829 TAS cytosol
GO:0006469 IDA negative regulation of protein kinase activity
GO:0008284 IDA positive regulation of cell proliferation
GO:0018108 TAS peptidyl-tyrosine phosphorylation
GO:0019901 IPI protein kinase binding
GO:0030292 IDA protein tyrosine kinase inhibitor activity
GO:0030307 IDA positive regulation of cell growth
GO:0030335 IDA positive regulation of cell migration
GO:0034453 IEA microtubule anchoring
GO:0042803 IDA protein homodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061099 IDA negative regulation of protein tyrosine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097419 Fgfr1op-001 protein_coding Mus_musculus 0 1509
ENSMUST00000162586 Fgfr1op-003 retained_intron Mus_musculus 0 824
ENSMUST00000024636 Fgfr1op-002 protein_coding Mus_musculus 0 732
ENSMUST00000161898 Fgfr1op-004 protein_coding Mus_musculus 0 377
ENSMUST00000063683 Tagap1-201 protein_coding Mus_musculus 0 261
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00002 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0003 55

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