C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FGFR1 oncogene partner
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622353 FGFR1OP-201 ENSG00000213066 9606 + 6:166999317-167042418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000622353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000622353 0.496±0.00 1.349±0.00 0.763±0.00 1.083±0.30 1.332±0.09 0.990±0.00 0.793±0.44 1.715±0.00 1.256±0.69 0.731±0.00 0.341±0.06 7.504±6.43 0.781±0.12 6.696±2.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0001 CGP 6:166929504-167052713
CIL_0002HA CIL_0002HA_0002 CGP 6:166999182-167139141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005815 IEA microtubule organizing center
GO:0034453 IEA microtubule anchoring

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024636 Fgfr1op-002 protein_coding Mus_musculus 0 652
ENSMUST00000162586 Fgfr1op-003 retained_intron Mus_musculus 0 652
ENSMUST00000097419 Fgfr1op-001 protein_coding Mus_musculus 0 652
ENSMUST00000161898 Fgfr1op-004 protein_coding Mus_musculus 0 377
ENSMUST00000063683 Tagap1-201 protein_coding Mus_musculus 0 261
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00006 55

Loading