C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fgfr1 oncogene partner
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069135 Fgfr1op 10090 + 17:8165501-8196804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024636 Fgfr1op-002 8165540-8196475 protein_coding
  ENSMUST00000097419 Fgfr1op-001 8165501-8196804 protein_coding
  ENSMUST00000161898 Fgfr1op-004 8182247-8194945 protein_coding
  ENSMUST00000162586 Fgfr1op-003 8165520-8176081 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024636ENSMUST00000097419ENSMUST00000161898ENSMUST00000162586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024636 1.813±0.26 0.605±0.29 5.962±0.13 4.738±1.25 1.584±0.29 1.241±0.26 2.043±0.29 2.124±0.35 2.954±1.71 1.861±0.86 1.705±0.31 2.440±1.18 4.978±1.20 5.869±1.64
ENSMUST00000097419 0.380±0.00 0.275±0.10 N/A N/A N/A 0.173±0.00 N/A 0.513±0.01 0.415±0.04 N/A 2.235±0.42 0.835±0.33 0.658±0.00 7.670±3.51
ENSMUST00000161898 N/A 0.368±0.00 N/A 3.221±0.00 0.478±0.00 N/A N/A N/A N/A N/A N/A 4.432±0.00 N/A 23.659±0.00
ENSMUST00000162586 N/A 0.146±0.00 N/A 1.959±0.00 0.700±0.00 N/A N/A N/A N/A N/A N/A 0.679±0.20 N/A 23.081±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0002 CGP 17:8128610-8196804
CIL_0002HA CIL_0002HA_0003 CGP 17:8165501-8257127

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0006469 IEA negative regulation of protein kinase activity
GO:0008284 IEA positive regulation of cell proliferation
GO:0019901 IEA protein kinase binding
GO:0030292 IEA protein tyrosine kinase inhibitor activity
GO:0030307 IEA positive regulation of cell growth
GO:0030335 IEA positive regulation of cell migration
GO:0034453 IEA microtubule anchoring
GO:0042803 IEA protein homodimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0061099 IEA negative regulation of protein tyrosine kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003058 fgfr1op FGFR1 oncogene partner protein_coding Danio_rerio
ENSG00000213066 FGFR1OP FGFR1 oncogene partner protein_coding Homo_sapiens

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