C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UBAP1-MVB12-associated (UMA) domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000219545 RPA3OS 9606 + 7:7640711-8004059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000406829 RPA3OS-001 7772361-7879223 protein_coding
  ENST00000463725 RPA3OS-003 7640752-7877443 processed_transcript
  ENST00000468567 RPA3OS-005 7640763-8004059 processed_transcript
  ENST00000469183 RPA3OS-002 7640752-8004053 processed_transcript
  ENST00000471760 RPA3OS-006 7640784-7692508 processed_transcript
  ENST00000482067 RPA3OS-007 7640794-7968020 processed_transcript
  ENST00000493246 RPA3OS-004 7640711-7738822 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000406829ENST00000469183
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000406829 2.279±0.00 3.163±0.00 2.077±0.00 4.095±0.00 2.546±0.00 2.861±0.00 6.405±0.00 2.562±1.00 3.336±0.00 0.569±0.00 4.240±0.84 3.131±0.82 3.520±0.00
ENST00000469183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.355±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V4 CIL_0002V4_0001 CGP 7:7566872-7718607
CIL_0002V7 CIL_0002V7_0001 CGP 7:7636518-8004059
CIL_0002V6 CIL_0002V6_0001 CGP 7:7640711-8094272

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076008 RPA3OS UBAP1-MVB12-associated (UMA) domain containing 1 protein_coding Danio_rerio
ENSMUSG00000089862 Gm16039 predicted gene 16039 protein_coding Mus_musculus

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