C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear prelamin A recognition factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000056 Narf 10090 + 11:121237253-121255856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103015 Narf-001 121237253-121255856 protein_coding
  ENSMUST00000151088 Narf-003 121245020-121245811 retained_intron
  ENSMUST00000154047 Narf-002 121244538-121245448 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103015ENSMUST00000154047
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103015 5.503±0.74 3.570±0.76 3.591±1.99 8.708±5.17 6.285±2.54 5.699±1.52 10.398±7.16 7.926±0.89 14.013±11.20 3.875±0.60 12.207±10.88 3.915±1.50 3.679±1.46 1.323±0.41
ENSMUST00000154047 N/A 13.131±3.71 N/A N/A 10.926±0.00 21.912±4.66 N/A N/A 15.406±1.78 N/A N/A 13.201±2.09 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043T CIL_00043T_0003 CGP 11:121222588-121255856
CIL_00054L CIL_00054L_0002 CGP 11:121237253-121309896

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005521 IEA lamin binding
GO:0005634 IEA nucleus
GO:0005638 IEA lamin filament
GO:0008150 ND biological_process
GO:0031981 IEA nuclear lumen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024184 narf nuclear prelamin A recognition factor protein_coding Danio_rerio
ENSDARG00000071319 narf nuclear prelamin A recognition factor protein_coding Danio_rerio
ENSG00000141562 NARF nuclear prelamin A recognition factor protein_coding Homo_sapiens

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