C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear prelamin A recognition factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151088 Narf-003 ENSMUSG00000000056 10090 + 11:121245020-121245811 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043T CIL_00043T_0003 CGP 11:121222588-121255856
CIL_00054L CIL_00054L_0002 CGP 11:121237253-121309896

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309794 NARF-001 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000345415 NARF-007 protein_coding Homo_sapiens 0 189
ENST00000374611 NARF-004 nonsense_mediated_decay Homo_sapiens 1.4013e-45 189
ENST00000390006 NARF-006 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000412079 NARF-201 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000457415 NARF-018 protein_coding Homo_sapiens 0 193
ENST00000577410 NARF-016 protein_coding Homo_sapiens 0 189
ENST00000577432 NARF-020 protein_coding Homo_sapiens 7e-34 148
ENST00000577812 NARF-008 retained_intron Homo_sapiens 1.4013e-45 189
ENST00000578082 NARF-021 retained_intron Homo_sapiens 0 200
ENST00000581202 NARF-005 nonsense_mediated_decay Homo_sapiens 8e-34 148
ENST00000581743 NARF-025 processed_transcript Homo_sapiens 0 193
ENST00000581795 NARF-003 nonsense_mediated_decay Homo_sapiens 9e-35 152
ENST00000582907 NARF-019 nonsense_mediated_decay Homo_sapiens 9e-35 152

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