C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141562-ENSG00000141568 CGP 9606 17:82458180-82644662
GeneTranscriptPositionBiotype
ENSG00000141562 (NARF)
nuclear prelamin A recognition factor 		ENST00000309794 (NARF-001) 82458606-82490537 protein_coding
ENST00000345415 (NARF-007) 82458649-82488262 protein_coding
ENST00000374611 (NARF-004) 82458697-82488263 nonsense_mediated_decay
ENST00000390006 (NARF-006) 82458185-82488255 protein_coding
ENST00000412079 (NARF-201) 82458664-82488265 protein_coding
ENST00000457415 (NARF-018) 82458703-82488215 protein_coding
ENST00000577410 (NARF-016) 82458875-82481093 protein_coding
ENST00000577432 (NARF-020) 82458724-82484900 protein_coding
ENST00000577812 (NARF-008) 82458712-82488259 retained_intron
ENST00000578082 (NARF-021) 82458746-82479206 retained_intron
ENST00000578820 (NARF-024) 82484808-82488259 retained_intron
ENST00000579083 (NARF-017) 82468499-82478827 retained_intron
ENST00000579198 (NARF-010) 82458180-82468799 protein_coding
ENST00000580296 (NARF-013) 82458359-82472614 protein_coding
ENST00000580748 (NARF-015) 82458754-82468787 nonsense_mediated_decay
ENST00000581202 (NARF-005) 82458664-82483816 nonsense_mediated_decay
ENST00000581743 (NARF-025) 82458714-82479993 processed_transcript
ENST00000581795 (NARF-003) 82458711-82484321 nonsense_mediated_decay
ENST00000582585 (NARF-002) 82458698-82461014 nonsense_mediated_decay
ENST00000582907 (NARF-019) 82458726-82488065 nonsense_mediated_decay
ENST00000583181 (NARF-011) 82458194-82468863 processed_transcript
ENST00000583908 (NARF-023) 82484539-82488258 retained_intron
ENST00000584192 (NARF-012) 82458228-82468896 processed_transcript
ENST00000584411 (NARF-014) 82458711-82472618 protein_coding
ENST00000584445 (NARF-009) 82480468-82488262 retained_intron
ENST00000584513 (NARF-022) 82481081-82488062 protein_coding
ENST00000584965 (NARF-026) 82480999-82488261 retained_intron
ENSG00000141568 (FOXK2)
forkhead box K2 		ENST00000335255 (FOXK2-001) 82519715-82604607 protein_coding
ENST00000473637 (FOXK2-002) 82519713-82602392 nonsense_mediated_decay
ENST00000526383 (FOXK2-005) 82559364-82584030 protein_coding
ENST00000527313 (FOXK2-006) 82519977-82571976 retained_intron
ENST00000529652 (FOXK2-003) 82593422-82602405 processed_transcript
ENST00000531030 (FOXK2-004) 82559340-82582914 protein_coding
ENST00000570585 (FOXK2-009) 82520294-82572122 retained_intron
ENST00000571160 (FOXK2-010) 82582775-82586043 processed_transcript
ENST00000571989 (FOXK2-012) 82593400-82601530 processed_transcript
ENST00000574694 (FOXK2-013) 82603637-82644662 processed_transcript
ENST00000575578 (FOXK2-011) 82586130-82587562 protein_coding
ENST00000622867 (FOXK2-201) 82519713-82602392 protein_coding
ENST00000624186 (FOXK2-008) 82598939-82603182 TEC
ENSG00000141580 (WDR45B)
WD repeat domain 45B 		ENST00000392325 (WDR45B-001) 82614562-82648535 protein_coding
ENST00000571767 (WDR45B-008) 82617354-82625959 processed_transcript
ENST00000571817 (WDR45B-005) 82619064-82648448 nonsense_mediated_decay
ENST00000571835 (WDR45B-007) 82616015-82636583 processed_transcript
ENST00000572583 (WDR45B-002) 82614576-82648318 nonsense_mediated_decay
ENST00000573616 (WDR45B-006) 82616524-82648444 nonsense_mediated_decay
ENST00000573656 (WDR45B-009) 82615986-82625535 retained_intron
ENST00000574828 (WDR45B-004) 82626789-82648553 processed_transcript
ENST00000576517 (WDR45B-010) 82614582-82619084 nonsense_mediated_decay
ENST00000577774 (WDR45B-011) 82616618-82617519 retained_intron
ENSG00000261845 (RP13-638C3.4)
 ENST00000576912 (RP13-638C3.4-001) 82602989-82604178 antisense
ENSG00000262652 (RP13-638C3.2)
 ENST00000570869 (RP13-638C3.2-001) 82578023-82578616 sense_intronic
ENSG00000265136 (RP13-638C3.6)
 ENST00000581815 (RP13-638C3.6-001) 82576616-82577391 processed_pseudogene
ENSG00000266236 (NARF-IT1)
NARF intronic transcript 1 (non-protein coding) 		ENST00000584012 (NARF-IT1-001) 82482098-82483388 sense_intronic
ENSG00000266445 (RP13-991F5.2)
 ENST00000582249 (RP13-991F5.2-001) 82476597-82477924 antisense
ENSG00000279744 (RP13-20L14.10)
 ENST00000623828 (RP13-20L14.10-001) 82462601-82464255 TEC
CIL_00054L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000056-ENSMUSG00000039275 CGP 10090 11:121237253-121309896
GeneTranscriptPositionBiotype
ENSMUSG00000000056 (Narf)
nuclear prelamin A recognition factor 		ENSMUST00000103015 (Narf-001) 121237253-121255856 protein_coding
ENSMUST00000151088 (Narf-003) 121245020-121245811 retained_intron
ENSMUST00000154047 (Narf-002) 121244538-121245448 retained_intron
ENSMUSG00000039275 (Foxk2)
forkhead box K2 		ENSMUST00000106113 (Foxk2-001) 121259990-121309896 protein_coding
ENSMUST00000151492 (Foxk2-003) 121298516-121299850 retained_intron
ENSMUST00000153579 (Foxk2-002) 121290744-121297089 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054L_0001ENSG00000141562ENST00000309794ENST00000345415ENST00000374611ENST00000390006ENST00000412079ENST00000457415ENST00000577432ENST00000577812ENST00000578820ENST00000579083ENST00000580296ENST00000581743ENST00000582907ENST00000584411ENST00000584445ENSG00000141568ENST00000335255ENST00000473637ENSG00000141580ENST00000392325ENST00000572583ENSG00000261845ENST00000576912ENSG00000262652ENST00000570869ENSG00000265136ENST00000581815ENSG00000266236ENST00000584012ENSG00000266445ENST00000582249ENSG00000279744ENST00000623828CIL_00054L_0002ENSMUSG00000000056ENSMUST00000103015ENSMUST00000154047ENSMUSG00000039275ENSMUST00000106113ENSMUST00000151492
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141562 ENST00000309794 N/A 3.871±0.00 N/A 0.513±0.00 N/A N/A 0.370±0.00 1.605±0.00 N/A N/A 0.557±0.00 1.586±0.00 0.743±0.00 5.844±1.55
ENST00000345415 N/A N/A N/A N/A N/A 0.805±0.00 0.634±0.00 N/A N/A N/A 3.046±0.00 3.779±3.08 3.125±0.28 10.117±0.00
ENST00000374611 4.272±0.00 N/A N/A 6.007±0.00 5.588±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000390006 7.109±0.00 15.738±0.00 N/A 4.397±3.20 6.055±0.00 13.141±0.00 6.789±6.14 8.132±0.00 8.506±0.00 5.443±0.00 4.598±3.03 8.385±1.87 7.176±1.33 16.732±0.00
ENST00000412079 N/A N/A N/A 0.853±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457415 N/A N/A N/A N/A 1.391±0.00 N/A N/A N/A N/A N/A 2.744±0.00 N/A N/A N/A
ENST00000577410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.214±0.00 4.703±0.00 21.566±0.00
ENST00000577812 2.915±0.00 7.482±0.00 N/A 0.557±0.00 2.780±0.00 0.707±0.00 N/A N/A N/A 0.389±0.00 N/A 3.351±2.24 N/A N/A
ENST00000578082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578820 N/A N/A N/A N/A N/A N/A N/A N/A 15.011±0.00 20.952±0.00 6.334±0.00 N/A N/A N/A
ENST00000579083 N/A N/A 6.198±0.00 N/A N/A N/A N/A 2.850±0.00 10.610±0.00 4.832±0.00 N/A N/A N/A N/A
ENST00000579198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.742±0.00 N/A N/A
ENST00000580748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581743 N/A N/A 0.941±0.00 2.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582907 N/A N/A 0.486±0.00 4.655±3.64 1.432±0.00 5.069±3.27 3.920±3.17 2.561±2.11 1.404±0.00 1.405±0.00 N/A 15.964±0.00 4.171±1.09 18.827±7.55
ENST00000583181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584411 N/A N/A N/A N/A N/A 2.200±0.00 2.325±0.00 N/A N/A 2.107±0.00 N/A N/A N/A N/A
ENST00000584445 N/A 6.961±0.00 0.290±0.00 N/A 1.986±1.29 N/A N/A N/A N/A 5.660±0.00 N/A N/A N/A N/A
ENST00000584513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141568 ENST00000335255 N/A 3.294±0.00 N/A 2.525±0.00 1.746±0.95 1.912±0.90 2.192±1.08 5.049±0.00 0.966±0.00 1.367±0.00 2.906±1.62 3.483±1.81 5.055±0.09 N/A
ENST00000473637 10.345±0.00 6.725±0.00 N/A N/A 6.922±0.00 4.453±2.65 7.436±0.00 N/A 2.641±1.37 15.310±0.00 6.682±5.31 8.614±5.38 8.582±0.33 20.050±0.54
ENST00000526383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141580 ENST00000392325 6.823±0.00 6.983±0.00 2.399±0.00 9.780±4.24 5.799±2.43 5.307±0.82 4.910±3.40 9.212±5.04 5.251±0.13 7.592±0.00 7.262±0.00 12.170±6.42 12.680±3.04 30.332±18.56
ENST00000571767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572583 N/A 7.774±0.00 N/A 15.986±9.37 16.704±0.00 8.506±0.00 7.069±0.00 17.788±0.00 5.451±0.00 7.738±1.14 N/A 14.303±2.75 7.048±1.18 22.798±5.49
ENST00000573616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261845 ENST00000576912 N/A N/A 2.416±0.00 N/A N/A N/A N/A N/A N/A N/A 7.658±5.44 N/A N/A N/A
ENSG00000262652 ENST00000570869 0.673±0.00 0.751±0.00 N/A 0.764±0.00 0.461±0.28 0.620±0.26 0.153±0.00 0.185±0.00 N/A 0.040±0.02 0.219±0.00 0.379±0.18 0.072±0.01 0.288±0.18
ENSG00000265136 ENST00000581815 0.107±0.00 N/A N/A 0.429±0.00 0.447±0.37 0.469±0.17 0.051±0.00 0.189±0.00 0.024±0.00 0.160±0.06 N/A 0.273±0.14 0.112±0.00 0.256±0.23
ENSG00000266236 ENST00000584012 0.350±0.00 2.758±0.00 N/A 0.263±0.00 0.407±0.00 0.068±0.00 0.106±0.00 0.037±0.00 N/A 0.436±0.22 0.083±0.00 0.562±0.15 N/A 0.316±0.02
ENSG00000266445 ENST00000582249 0.110±0.00 0.978±0.00 N/A 0.320±0.00 0.520±0.00 0.072±0.02 0.044±0.00 0.418±0.00 0.126±0.00 0.375±0.10 0.041±0.00 0.075±0.03 N/A 0.164±0.03
ENSG00000279744 ENST00000623828 0.976±0.00 4.193±0.00 0.080±0.00 1.331±1.22 0.447±0.24 0.654±0.00 0.135±0.05 0.541±0.00 0.196±0.06 0.469±0.44 0.048±0.00 0.461±0.22 0.076±0.03 0.731±0.31
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000056 ENSMUST00000103015 5.503±0.74 3.570±0.76 3.591±1.99 8.708±5.17 6.285±2.54 5.699±1.52 10.398±7.16 7.926±0.89 14.013±11.20 3.875±0.60 12.207±10.88 3.915±1.50 3.679±1.46 1.323±0.41
ENSMUST00000151088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154047 N/A 13.131±3.71 N/A N/A 10.926±0.00 21.912±4.66 N/A N/A 15.406±1.78 N/A N/A 13.201±2.09 N/A N/A
ENSMUSG00000039275 ENSMUST00000106113 12.411±1.89 8.260±1.00 7.896±0.11 17.416±5.13 5.034±2.27 6.536±1.42 2.449±1.26 5.218±1.97 4.760±3.17 6.587±2.51 9.088±0.90 10.749±3.17 6.930±2.68 16.265±5.87
ENSMUST00000151492 N/A 26.669±0.00 N/A 23.445±0.00 N/A 11.178±0.00 N/A N/A N/A N/A N/A 28.702±3.84 23.025±14.14 50.965±0.00
ENSMUST00000153579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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