C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calmodulin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001175 Calm1 10090 + 12:100199435-100209806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001204 Calm1-002 100200144-100209806 protein_coding
  ENSMUST00000110082 Calm1-001 100199435-100209806 protein_coding
  ENSMUST00000127300 Calm1-004 100205403-100206495 retained_intron
  ENSMUST00000153524 Calm1-003 100199529-100203937 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001204ENSMUST00000110082ENSMUST00000127300ENSMUST00000153524
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001204 N/A N/A N/A 60.284±0.00 N/A N/A N/A N/A N/A N/A N/A 22.009±9.47 55.312±0.00 28.654±0.00
ENSMUST00000110082 46.316±3.80 14.788±2.39 36.584±10.36 102.916±72.41 35.765±7.20 58.966±3.80 19.212±4.40 28.168±1.61 24.086±10.30 67.470±6.69 79.626±18.08 30.133±4.53 82.682±27.33 66.378±2.39
ENSMUST00000127300 N/A N/A N/A 1317.140±0.00 N/A N/A N/A N/A N/A N/A N/A 509.059±0.00 1117.003±178.37 671.140±0.00
ENSMUST00000153524 173.076±15.47 253.405±38.07 112.221±0.00 144.274±18.75 268.753±39.31 417.168±35.50 39.800±8.07 72.044±12.44 66.444±21.01 254.878±68.83 N/A 217.222±19.06 152.367±8.60 190.440±6.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U8 CIL_0001U8_0002 CGP 12:100125452-100209806
CIL_0005CA CIL_0005CA_0002 CGP 12:100199435-100520822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000922 IEA spindle pole
GO:0001975 IEA response to amphetamine
GO:0002027 IEA regulation of heart rate
GO:0005509 IEA calcium ion binding
GO:0005513 IEA detection of calcium ion
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005829 TAS cytosol
GO:0005876 IEA spindle microtubule
GO:0005886 IEA plasma membrane
GO:0007190 IEA activation of adenylate cyclase activity
GO:0008179 IEA adenylate cyclase binding
GO:0010880 IEA regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0019722 IEA calcium-mediated signaling
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0021762 IEA substantia nigra development
GO:0030017 IEA sarcomere
GO:0030234 IEA enzyme regulator activity
GO:0030235 IEA nitric-oxide synthase regulator activity
GO:0030426 IEA growth cone
GO:0030801 IEA positive regulation of cyclic nucleotide metabolic process
GO:0031432 IEA titin binding
GO:0031800 IEA type 3 metabotropic glutamate receptor binding
GO:0031982 IEA vesicle
GO:0031996 IEA thioesterase binding
GO:0031997 IEA N-terminal myristoylation domain binding
GO:0032465 IEA regulation of cytokinesis
GO:0032516 IEA positive regulation of phosphoprotein phosphatase activity
GO:0034704 IEA calcium channel complex
GO:0035307 IEA positive regulation of protein dephosphorylation
GO:0043005 IEA neuron projection
GO:0043274 IEA phospholipase binding
GO:0043548 IEA phosphatidylinositol 3-kinase binding
GO:0044325 IEA ion channel binding
GO:0047485 IEA protein N-terminus binding
GO:0048306 IEA calcium-dependent protein binding
GO:0050998 IEA nitric-oxide synthase binding
GO:0051000 IEA positive regulation of nitric-oxide synthase activity
GO:0051343 IEA positive regulation of cyclic-nucleotide phosphodiesterase activity
GO:0051412 IEA response to corticosterone
GO:0051592 IEA response to calcium ion
GO:0055117 IEA regulation of cardiac muscle contraction
GO:0060314 IEA regulation of ryanodine-sensitive calcium-release channel activity
GO:0060316 IEA positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0070062 IEA extracellular vesicular exosome
GO:0072542 IEA protein phosphatase activator activity
GO:1901841 IEA regulation of high voltage-gated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074057 calm1a calmodulin 1a protein_coding Danio_rerio
ENSG00000198668 CALM1 calmodulin 1 (phosphorylase kinase, delta) protein_coding Homo_sapiens

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