C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, beta 3 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003352 Cacnb3 10090 + 15:98632220-98644530 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003442 Cacnb3-201 98634764-98644530 protein_coding
  ENSMUST00000109150 Cacnb3-202 98632220-98644530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003442ENSMUST00000109150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003442 2.597±1.43 2.820±1.40 7.179±0.04 35.790±28.60 3.713±0.98 3.872±0.37 0.618±0.12 1.183±0.15 0.131±0.06 2.096±0.32 0.549±0.03 7.651±3.54 4.683±1.52 0.270±0.14
ENSMUST00000109150 13.741±13.23 4.450±2.41 29.070±2.36 84.307±1.51 32.036±12.51 32.001±10.40 0.430±0.16 4.458±2.57 0.280±0.06 8.069±4.05 0.663±0.18 30.505±13.62 2.705±0.53 0.350±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DH CIL_0003DH_0003 CGP 15:98589994-98644530
CIL_0003DO CIL_0003DO_0003 CGP 15:98632220-98662889

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005891 IDA voltage-gated calcium channel complex
GO:0006816 IEA calcium ion transport
GO:0008331 TAS high voltage-gated calcium channel activity
GO:0016020 IEA membrane
GO:0016324 IEA apical plasma membrane
GO:0019901 IEA protein kinase binding
GO:0034765 IEA regulation of ion transmembrane transport
GO:0050852 IMP T cell receptor signaling pathway
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001881 cacnb3a calcium channel, voltage-dependent, beta 3a protein_coding Danio_rerio
ENSDARG00000076030 cacnb3b calcium channel, voltage-dependent, beta 3b protein_coding Danio_rerio
ENSG00000167535 CACNB3 calcium channel, voltage-dependent, beta 3 subunit protein_coding Homo_sapiens

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