C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine zipper-EF-hand containing transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149886 Letm1-003 ENSMUSG00000005299 10090 - 5:33742534-33753562 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000149886
Transcript ID Ovary Placenta
ENSMUST00000149886 3.307±0.00 2.664±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006V3 CIL_0006V3_0002 CGP 5:33721724-33782817
CIL_0006V8 CIL_0006V8_0002 CGP 5:33739673-33897975

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302787 LETM1-001 protein_coding Homo_sapiens 0 577
ENST00000511977 LETM1-006 retained_intron Homo_sapiens 0 424
ENST00000604293 RP11-622C24.1-001 processed_pseudogene Homo_sapiens 0 342

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