C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135639 Fbxo11-002 ENSMUSG00000005371 10090 - 17:87991418-88008696 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungOvaryPlacentaENSMUST00000135639
Transcript ID Adipose Brain Breast Heart Kidney Lung Ovary Placenta
ENSMUST00000135639 6.139±2.08 14.845±4.79 7.474±2.02 3.778±1.16 4.230±0.23 15.778±0.00 20.099±4.94 15.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066I CIL_00066I_0002 CGP 17:87975050-88065291
CIL_00063U CIL_00063U_0002 CGP 17:87990859-88490533

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088099 fbxo11a-201 protein_coding Danio_rerio 0 710
ENSDART00000139490 fbxo11a-002 protein_coding Danio_rerio 0 494
ENSDART00000139513 fbxo11a-003 processed_transcript Danio_rerio 0 213
ENST00000234420 MSH6-001 protein_coding Homo_sapiens 0 1085
ENST00000316377 FBXO11-201 protein_coding Homo_sapiens 0 619
ENST00000402508 FBXO11-008 protein_coding Homo_sapiens 0 2460
ENST00000403359 FBXO11-001 protein_coding Homo_sapiens 0 2460
ENST00000405808 FBXO11-014 protein_coding Homo_sapiens 0 307
ENST00000434234 FBXO11-013 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000465204 FBXO11-007 retained_intron Homo_sapiens 0 1788
ENST00000470899 FBXO11-009 retained_intron Homo_sapiens 0 797
ENST00000492225 FBXO11-005 retained_intron Homo_sapiens 0 619
ENST00000493962 FBXO11-006 protein_coding Homo_sapiens 0 680

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