C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005504 Fbxo11-001 ENSMUSG00000005371 10090 - 17:87990859-88065291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverMuscleOvaryPlacentaENSMUST00000005504
Transcript ID Adipose Bladder Brain Breast Liver Muscle Ovary Placenta
ENSMUST00000005504 1.581±0.00 5.264±0.00 10.003±0.90 4.009±0.00 2.320±0.24 3.970±0.90 5.350±0.27 4.456±1.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066I CIL_00066I_0002 CGP 17:87975050-88065291
CIL_00063U CIL_00063U_0002 CGP 17:87990859-88490533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0007605 IMP sensory perception of sound
GO:0008270 IEA zinc ion binding
GO:0016274 IEA protein-arginine N-methyltransferase activity
GO:0016567 IEA protein ubiquitination
GO:0035246 IEA peptidyl-arginine N-methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088099 fbxo11a-201 protein_coding Danio_rerio 0 1847
ENSDART00000139490 fbxo11a-002 protein_coding Danio_rerio 0 494
ENSDART00000139513 fbxo11a-003 processed_transcript Danio_rerio 0 213
ENSDART00000153436 fbxo11a-001 protein_coding Danio_rerio 1.96182e-44 185
ENST00000234420 MSH6-001 protein_coding Homo_sapiens 0 1988
ENST00000316377 FBXO11-201 protein_coding Homo_sapiens 0 2615
ENST00000402508 FBXO11-008 protein_coding Homo_sapiens 0 5592
ENST00000403359 FBXO11-001 protein_coding Homo_sapiens 0 5934
ENST00000405808 FBXO11-014 protein_coding Homo_sapiens 0 307
ENST00000424163 FBXO11-004 protein_coding Homo_sapiens 0 652
ENST00000434234 FBXO11-013 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000465204 FBXO11-007 retained_intron Homo_sapiens 0 2691
ENST00000470899 FBXO11-009 retained_intron Homo_sapiens 0 797
ENST00000480038 FBXO11-010 processed_transcript Homo_sapiens 0 590
ENST00000492225 FBXO11-005 retained_intron Homo_sapiens 0 2623
ENST00000493962 FBXO11-006 protein_coding Homo_sapiens 0 2338

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