C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomodulin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130545 Tmod4-002 ENSMUSG00000005628 10090 + 3:95126204-95128744 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaENSMUST00000130545
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta
ENSMUST00000130545 0.385±0.00 0.108±0.00 0.138±0.06 11.465±6.73 0.188±0.00 1.443±0.00 0.079±0.00 0.669±0.31 0.443±0.26 0.113±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064I CIL_00064I_0002 CGP 3:95111022-95129209
CIL_0003MO CIL_0003MO_0002 CGP 3:95124476-95134011

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024294 tmod4-201 protein_coding Danio_rerio 2e-40 171
ENSDART00000137153 tmod4-001 protein_coding Danio_rerio 2e-40 171
ENST00000295314 TMOD4-001 protein_coding Homo_sapiens 0 946
ENST00000441701 TMOD4-005 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000463543 TMOD4-002 nonsense_mediated_decay Homo_sapiens 0 926
ENST00000466891 TMOD4-004 protein_coding Homo_sapiens 0 255
ENST00000488488 TMOD4-006 processed_transcript Homo_sapiens 0 566
ENST00000491094 VPS72-003 retained_intron Homo_sapiens 0 946

Loading