C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006362 Cbfa2t3 10090 - 8:122628739-122699109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006525 Cbfa2t3-003 122629463-122678072 protein_coding
  ENSMUST00000064674 Cbfa2t3-002 122629938-122678175 protein_coding
  ENSMUST00000127984 Cbfa2t3-001 122628739-122699109 protein_coding
  ENSMUST00000134045 Cbfa2t3-005 122639014-122678694 protein_coding
  ENSMUST00000142535 Cbfa2t3-007 122639018-122646466 processed_transcript
  ENSMUST00000147374 Cbfa2t3-006 122643004-122678111 processed_transcript
  ENSMUST00000148630 Cbfa2t3-004 122650028-122698902 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0002 VISTA 8:122411841-123013825
CIL_0008HA CIL_0008HA_0002 VISTA 8:122617544-123223043
CIL_0006AK CIL_0006AK_0003 CGP 8:122619471-122699109
CIL_0006AJ CIL_0006AJ_0003 CGP 8:122628739-122817880

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation
GO:0030851 IEA granulocyte differentiation
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079012 CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 protein_coding Danio_rerio
ENSG00000129993 CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 protein_coding Homo_sapiens

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