C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000064674  |
Cbfa2t3-002 |
ENSMUSG00000006362 |
10090 | - |
8:122629938-122678175  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091T | CIL_00091T_0002 | VISTA | 8:122411841-123013825 |
| CIL_0008HA | CIL_0008HA_0002 | VISTA | 8:122617544-123223043 |
| CIL_0006AK | CIL_0006AK_0003 | CGP | 8:122619471-122699109 |
| CIL_0006AJ | CIL_0006AJ_0003 | CGP | 8:122628739-122817880 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003682 | IDA | chromatin binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005622 | IDA | intracellular |
| GO:0045944 | IGI | positive regulation of transcription from RNA polymerase II promoter |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000268679
|
CBFA2T3-001 | protein_coding | Homo_sapiens | 0 | 1679 |
|
ENST00000327483
|
CBFA2T3-002 | protein_coding | Homo_sapiens | 0 | 1450 |
|
ENST00000562719
|
CBFA2T3-008 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000563640
|
CBFA2T3-009 | protein_coding | Homo_sapiens | 3e-37 | 161 |
|
ENST00000563856
|
CBFA2T3-004 | retained_intron | Homo_sapiens | 0 | 451 |
|
ENST00000563920
|
CBFA2T3-005 | retained_intron | Homo_sapiens | 0 | 399 |
|
ENST00000564416
|
CBFA2T3-011 | protein_coding | Homo_sapiens | 0 | 241 |
|
ENST00000569443
|
CBFA2T3-010 | protein_coding | Homo_sapiens | 0 | 298 |
|
ENST00000569464
|
CBFA2T3-006 | protein_coding | Homo_sapiens | 0 | 1238 |
|
ENST00000570046
|
CBFA2T3-012 | protein_coding | Homo_sapiens | 3e-23 | 111 |
