C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006525 Cbfa2t3-003 ENSMUSG00000006362 10090 - 8:122629463-122678072 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0002 VISTA 8:122411841-123013825
CIL_0008HA CIL_0008HA_0002 VISTA 8:122617544-123223043
CIL_0006AK CIL_0006AK_0003 CGP 8:122619471-122699109
CIL_0006AJ CIL_0006AJ_0003 CGP 8:122628739-122817880

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268679 CBFA2T3-001 protein_coding Homo_sapiens 0 1450
ENST00000327483 CBFA2T3-002 protein_coding Homo_sapiens 0 1635
ENST00000562719 CBFA2T3-008 protein_coding Homo_sapiens 3e-37 161
ENST00000563640 CBFA2T3-009 protein_coding Homo_sapiens 0 257
ENST00000563856 CBFA2T3-004 retained_intron Homo_sapiens 0 451
ENST00000563920 CBFA2T3-005 retained_intron Homo_sapiens 0 399
ENST00000564416 CBFA2T3-011 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000569443 CBFA2T3-010 protein_coding Homo_sapiens 0 459
ENST00000569464 CBFA2T3-006 protein_coding Homo_sapiens 0 1009
ENST00000570046 CBFA2T3-012 protein_coding Homo_sapiens 3e-23 111

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