C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serum amyloid A-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006763 Saal1 10090 - 7:46686108-46710680 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006948 Saal1-004 46689304-46710641 retained_intron
  ENSMUST00000131747 Saal1-005 46689269-46708917 retained_intron
  ENSMUST00000142381 Saal1-003 46691816-46710658 retained_intron
  ENSMUST00000143082 Saal1-001 46686108-46710680 protein_coding
  ENSMUST00000145813 Saal1-002 46692238-46710661 retained_intron
  ENSMUST00000146316 Saal1-006 46689306-46689897 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006948ENSMUST00000131747ENSMUST00000142381ENSMUST00000143082ENSMUST00000145813
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006948 N/A N/A 0.979±0.02 0.926±0.00 N/A N/A N/A N/A 1.081±0.56 N/A 0.481±0.08 2.562±1.20 1.936±0.72 2.287±1.40
ENSMUST00000131747 1.310±0.68 1.024±0.13 0.751±0.23 1.426±0.18 1.357±0.56 0.858±0.18 0.304±0.05 0.469±0.06 0.656±0.25 0.728±0.22 0.224±0.05 1.961±0.59 0.613±0.16 0.855±0.26
ENSMUST00000142381 2.613±1.16 2.799±0.47 1.516±0.47 1.627±0.00 2.836±0.79 4.400±1.08 0.399±0.14 2.145±0.66 1.852±0.82 2.717±0.95 0.278±0.06 6.166±2.83 1.450±1.08 3.780±1.60
ENSMUST00000143082 1.202±0.54 0.649±0.13 1.092±0.13 2.096±0.28 1.074±0.19 0.517±0.12 0.325±0.04 0.709±0.16 0.532±0.36 0.721±0.06 0.261±0.07 1.555±0.66 0.800±0.42 0.746±0.22
ENSMUST00000145813 N/A 0.385±0.05 N/A N/A 0.471±0.00 N/A 0.141±0.05 N/A N/A 0.359±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041A CIL_00041A_0003 CGP 7:46647130-46710680

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018681 saal1 serum amyloid A-like 1 protein_coding Danio_rerio
ENSG00000166788 SAAL1 serum amyloid A-like 1 protein_coding Homo_sapiens

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