C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum amyloid A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143082 Saal1-001 ENSMUSG00000006763 10090 - 7:46686108-46710680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143082 1.202±0.54 0.649±0.13 1.092±0.13 2.096±0.28 1.074±0.19 0.517±0.12 0.325±0.04 0.709±0.16 0.532±0.36 0.721±0.06 0.261±0.07 1.555±0.66 0.800±0.42 0.746±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041A CIL_00041A_0003 CGP 7:46647130-46710680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300013 SAAL1-003 protein_coding Homo_sapiens 0 1258
ENST00000524803 SAAL1-001 protein_coding Homo_sapiens 0 1266
ENST00000529318 SAAL1-002 protein_coding Homo_sapiens 0 1223
ENST00000530180 SAAL1-007 protein_coding Homo_sapiens 0 418
ENST00000531581 SAAL1-004 nonsense_mediated_decay Homo_sapiens 0 1262
ENST00000531751 SAAL1-008 protein_coding Homo_sapiens 0 630
ENST00000533851 SAAL1-006 processed_transcript Homo_sapiens 0 575

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