C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum amyloid A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142381 Saal1-003 ENSMUSG00000006763 10090 - 7:46691816-46710658 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142381 2.613±1.16 2.799±0.47 1.516±0.47 1.627±0.00 2.836±0.79 4.400±1.08 0.399±0.14 2.145±0.66 1.852±0.82 2.717±0.95 0.278±0.06 6.166±2.83 1.450±1.08 3.780±1.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041A CIL_00041A_0003 CGP 7:46647130-46710680

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300013 SAAL1-003 protein_coding Homo_sapiens 0 1103
ENST00000524803 SAAL1-001 protein_coding Homo_sapiens 0 1112
ENST00000529318 SAAL1-002 protein_coding Homo_sapiens 0 1090
ENST00000530180 SAAL1-007 protein_coding Homo_sapiens 0 418
ENST00000531581 SAAL1-004 nonsense_mediated_decay Homo_sapiens 0 1107
ENST00000531751 SAAL1-008 protein_coding Homo_sapiens 0 630
ENST00000533851 SAAL1-006 processed_transcript Homo_sapiens 0 575

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