C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum amyloid A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131747 Saal1-005 ENSMUSG00000006763 10090 - 7:46689269-46708917 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131747 1.310±0.68 1.024±0.13 0.751±0.23 1.426±0.18 1.357±0.56 0.858±0.18 0.304±0.05 0.469±0.06 0.656±0.25 0.728±0.22 0.224±0.05 1.961±0.59 0.613±0.16 0.855±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041A CIL_00041A_0003 CGP 7:46647130-46710680

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300013 SAAL1-003 protein_coding Homo_sapiens 0 610
ENST00000524803 SAAL1-001 protein_coding Homo_sapiens 0 610
ENST00000529318 SAAL1-002 protein_coding Homo_sapiens 0 610
ENST00000530180 SAAL1-007 protein_coding Homo_sapiens 0 291
ENST00000531581 SAAL1-004 nonsense_mediated_decay Homo_sapiens 0 610
ENST00000531751 SAAL1-008 protein_coding Homo_sapiens 0 425
ENST00000533851 SAAL1-006 processed_transcript Homo_sapiens 0 448

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