C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sulfatase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088086 Sulf2-004 ENSMUSG00000006800 10090 - 2:166073920-166155285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088086
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088086 26.716±4.61 14.219±7.13 20.571±1.10 15.820±3.43 13.287±4.49 7.824±0.00 6.489±1.52 5.553±1.30 3.462±1.68 9.201±3.55 1.512±0.32 78.041±30.86 27.025±15.74 2.018±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NW CIL_0008NW_0002 VISTA 2:165614396-166214787
CIL_0006IW CIL_0006IW_0003 CGP 2:165784152-166073242
CIL_0001Y0 CIL_0001Y0_0002 CGP 2:165992636-166155663
CIL_0008NU CIL_0008NU_0002 VISTA 2:166052865-166654821
CIL_00025A CIL_00025A_0002 CGP 2:166073089-166713832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IGI kidney development
GO:0002063 IMP chondrocyte development
GO:0003094 IGI glomerular filtration
GO:0004065 ISS arylsulfatase activity
GO:0005509 IEA calcium ion binding
GO:0005615 ISO extracellular space
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006790 ISO sulfur compound metabolic process
GO:0008449 ISO N-acetylglucosamine-6-sulfatase activity
GO:0009986 ISS cell surface
GO:0010575 IGI positive regulation vascular endothelial growth factor production
GO:0014846 IGI esophagus smooth muscle contraction
GO:0030201 IMP heparan sulfate proteoglycan metabolic process
GO:0032836 IGI glomerular basement membrane development
GO:0035860 IDA glial cell-derived neurotrophic factor receptor signaling pathway
GO:0040037 IGI negative regulation of fibroblast growth factor receptor signaling pathway
GO:0048706 IGI embryonic skeletal system development
GO:0051216 IMP cartilage development
GO:0060348 IGI bone development
GO:0060384 IGI innervation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000035865 sulf2b-001 protein_coding Danio_rerio 0 555
ENSDART00000104904 sulf2b-201 protein_coding Danio_rerio 0 481
ENSDART00000139135 sulf2b-002 protein_coding Danio_rerio 0 481
ENST00000359930 SULF2-001 protein_coding Homo_sapiens 0 3029
ENST00000437955 SULF2-002 protein_coding Homo_sapiens 0 665
ENST00000463221 SULF2-008 retained_intron Homo_sapiens 0 850
ENST00000467815 SULF2-015 protein_coding Homo_sapiens 0 2981
ENST00000478766 SULF2-010 processed_transcript Homo_sapiens 0 335
ENST00000479970 SULF2-004 retained_intron Homo_sapiens 2e-31 141
ENST00000484875 SULF2-005 protein_coding Homo_sapiens 0 3029

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