C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000012848 Rps5 10090 + 7:12922290-12926686 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004554 Rps5-001 12922290-12926686 protein_coding
  ENSMUST00000108539 Rps5-002 12922290-12926685 protein_coding
  ENSMUST00000127669 Rps5-007 12926038-12926684 retained_intron
  ENSMUST00000131795 Rps5-005 12922336-12923364 retained_intron
  ENSMUST00000137329 Rps5-004 12922437-12926494 protein_coding
  ENSMUST00000139349 Rps5-006 12922331-12926220 retained_intron
  ENSMUST00000147435 Rps5-003 12922318-12926494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004554ENSMUST00000137329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004554 945.234±437.01 273.738±64.00 1147.855±143.67 566.075±355.79 836.649±295.03 868.258±141.14 325.013±44.47 582.316±31.17 858.605±609.22 628.044±20.51 366.639±19.28 1741.222±701.21 664.295±345.94 205.322±92.18
ENSMUST00000137329 N/A 284.183±43.20 N/A N/A 275.179±134.91 199.189±35.15 N/A N/A 86.953±17.17 N/A N/A 520.278±43.59 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000007 CIL_000007_0002 CGP 7:12922290-12931072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0006450 IEA regulation of translational fidelity
GO:0016020 IEA membrane
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0030529 ISO ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043453 rps5 ribosomal protein S5 protein_coding Danio_rerio
ENSG00000083845 RPS5 ribosomal protein S5 protein_coding Homo_sapiens

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