C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000007_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000083845-ENSG00000269855 CGP 9606 19:58386400-58397079
GeneTranscriptPositionBiotype
ENSG00000083845 (RPS5)
ribosomal protein S5
ENST00000196551 (RPS5-201) 58387269-58394803 protein_coding
ENST00000596046 (RPS5-002) 58387289-58394806 protein_coding
ENST00000596314 (RPS5-004) 58386507-58394736 protein_coding
ENST00000598098 (RPS5-005) 58387264-58394804 protein_coding
ENST00000598495 (RPS5-006) 58387269-58394800 protein_coding
ENST00000598807 (RPS5-007) 58387284-58393953 retained_intron
ENST00000599232 (RPS5-003) 58393056-58394802 retained_intron
ENST00000599909 (RPS5-008) 58387275-58388594 retained_intron
ENST00000601521 (RPS5-001) 58386400-58394806 protein_coding
ENSG00000266640 (MIR4754)
microRNA 4754
ENST00000582477 (MIR4754-201) 58386770-58386858 miRNA
ENSG00000269855 (CTD-2619J13.28)
ring finger protein 225
ENST00000601382 (CTD-2619J13.28-001) 58396090-58397079 protein_coding
CIL_000007_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000012848-ENSMUSG00000033967 CGP 10090 7:12922290-12931072
GeneTranscriptPositionBiotype
ENSMUSG00000012848 (Rps5)
ribosomal protein S5
ENSMUST00000004554 (Rps5-001) 12922290-12926686 protein_coding
ENSMUST00000108539 (Rps5-002) 12922290-12926685 protein_coding
ENSMUST00000127669 (Rps5-007) 12926038-12926684 retained_intron
ENSMUST00000131795 (Rps5-005) 12922336-12923364 retained_intron
ENSMUST00000137329 (Rps5-004) 12922437-12926494 protein_coding
ENSMUST00000139349 (Rps5-006) 12922331-12926220 retained_intron
ENSMUST00000147435 (Rps5-003) 12922318-12926494 protein_coding
ENSMUSG00000033967 (2310014L17Rik)
RIKEN cDNA 2310014L17 gene
ENSMUST00000045870 (2310014L17Rik-201) 12927416-12931072 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000007_0001ENSG00000083845ENST00000196551ENST00000596046ENST00000596314ENST00000598098ENST00000598495ENST00000598807ENST00000599232ENST00000599909ENST00000601521ENSG00000266640ENST00000582477ENSG00000269855ENST00000601382CIL_000007_0002ENSMUSG00000012848ENSMUST00000004554ENSMUST00000108539ENSMUST00000127669ENSMUST00000131795ENSMUST00000137329ENSMUST00000139349ENSMUST00000147435ENSMUSG00000033967ENSMUST00000045870
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000007_0001ENSG00000083845ENST00000196551ENST00000598098ENST00000598807ENSG00000266640ENST00000582477ENSG00000269855ENST00000601382CIL_000007_0002ENSMUSG00000012848ENSMUST00000004554ENSMUST00000137329ENSMUSG00000033967ENSMUST00000045870
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083845 ENST00000196551 475.914±0.00 579.582±0.00 49.312±0.00 125.966±23.54 291.296±144.73 441.604±349.36 101.701±69.11 235.580±95.26 222.936±70.20 457.125±310.94 292.464±91.06 847.245±593.64 818.681±338.10 298.229±135.79
ENST00000596046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598098 N/A N/A 40.702±0.00 N/A 72.044±0.00 126.713±0.00 13.816±0.00 37.525±0.00 27.280±0.00 N/A 99.379±0.00 75.272±0.00 N/A N/A
ENST00000598495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598807 N/A N/A 7.489±0.00 N/A 65.310±0.00 72.215±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266640 ENST00000582477 N/A N/A N/A N/A N/A N/A 0.474±0.00 N/A N/A N/A 0.905±0.00 N/A 1.673±0.00 N/A
ENSG00000269855 ENST00000601382 N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A 0.162±0.01 N/A 0.632±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012848 ENSMUST00000004554 945.234±437.01 273.738±64.00 1147.855±143.67 566.075±355.79 836.649±295.03 868.258±141.14 325.013±44.47 582.316±31.17 858.605±609.22 628.044±20.51 366.639±19.28 1741.222±701.21 664.295±345.94 205.322±92.18
ENSMUST00000108539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137329 N/A 284.183±43.20 N/A N/A 275.179±134.91 199.189±35.15 N/A N/A 86.953±17.17 N/A N/A 520.278±43.59 N/A N/A
ENSMUST00000139349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033967 ENSMUST00000045870 0.211±0.09 0.197±0.07 1.071±0.04 0.745±0.43 0.752±0.17 0.282±0.07 0.054±0.02 0.052±0.02 0.339±0.17 2.347±1.09 0.072±0.03 0.592±0.24 0.249±0.10 0.093±0.03

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