C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome c oxidase subunit VIc
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014313 Cox6c 10090 - 15:35925886-35938246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000014457 Cox6c-001 35931976-35938246 protein_coding
  ENSMUST00000127999 Cox6c-002 35931983-35938207 retained_intron
  ENSMUST00000153512 Cox6c-004 35931980-35937645 protein_coding
  ENSMUST00000155638 Cox6c-005 35925886-35935331 nonsense_mediated_decay
  ENSMUST00000156915 Cox6c-003 35935387-35938009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014457 227.119±24.48 223.386±15.93 827.626±36.19 264.436±79.53 200.455±92.71 401.439±86.96 1407.642±314.46 1081.686±284.50 447.465±111.97 198.097±12.56 794.589±62.32 241.189±159.56 285.812±77.07 318.853±82.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0002 CGP 15:35296098-35931228
CIL_0006JN CIL_0006JN_0002 CGP 15:35371546-35938246
CIL_0008YK CIL_0008YK_0002 VISTA 15:35447988-36049219
CIL_0006JM CIL_0006JM_0002 CGP 15:35925886-36140400

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004129 IEA cytochrome-c oxidase activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038577 cox6c cytochrome c oxidase subunit VIc protein_coding Danio_rerio
ENSG00000164919 COX6C cytochrome c oxidase subunit VIc protein_coding Homo_sapiens

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