C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164919-ENSG00000132554 CGP 9606 8:99873200-100131268
GeneTranscriptPositionBiotype
ENSG00000132554 (RGS22)
regulator of G-protein signaling 22 		ENST00000360863 (RGS22-001) 99960936-100106116 protein_coding
ENST00000517769 (RGS22-003) 99961058-100041967 retained_intron
ENST00000517828 (RGS22-007) 99999347-100125798 protein_coding
ENST00000517843 (RGS22-010) 99961066-99978051 protein_coding
ENST00000518474 (RGS22-015) 100038523-100042768 retained_intron
ENST00000518719 (RGS22-008) 100093162-100106000 retained_intron
ENST00000519092 (RGS22-018) 100071410-100105624 protein_coding
ENST00000519408 (RGS22-009) 100071429-100106317 protein_coding
ENST00000519421 (RGS22-011) 100002322-100008526 processed_transcript
ENST00000519725 (RGS22-017) 100008497-100106000 nonsense_mediated_decay
ENST00000520117 (RGS22-012) 100066239-100131268 protein_coding
ENST00000520923 (RGS22-002) 100038520-100080274 retained_intron
ENST00000522064 (RGS22-013) 100080295-100105621 processed_transcript
ENST00000523287 (RGS22-004) 99961051-100105619 protein_coding
ENST00000523437 (RGS22-006) 99961067-100105962 protein_coding
ENST00000523600 (RGS22-014) 100080694-100105613 processed_transcript
ENST00000524182 (RGS22-016) 100046233-100050896 processed_transcript
ENST00000617334 (RGS22-201) 99960940-100106116 protein_coding
ENSG00000164919 (COX6C)
cytochrome c oxidase subunit VIc 		ENST00000297564 (COX6C-003) 99878148-99893684 protein_coding
ENST00000517682 (COX6C-005) 99878149-99893681 protein_coding
ENST00000518171 (COX6C-002) 99885992-99893697 protein_coding
ENST00000520271 (COX6C-007) 99878149-99893622 protein_coding
ENST00000520468 (COX6C-001) 99877866-99894062 protein_coding
ENST00000520517 (COX6C-009) 99874996-99893707 nonsense_mediated_decay
ENST00000522934 (COX6C-010) 99873200-99893706 nonsense_mediated_decay
ENST00000522940 (COX6C-006) 99878151-99893623 protein_coding
ENST00000523016 (COX6C-004) 99887061-99893680 protein_coding
ENST00000524245 (COX6C-008) 99878150-99893135 protein_coding
ENST00000606245 (COX6C-011) 99878149-99878794 retained_intron
ENSG00000221753 (MIR1273A)
microRNA 1273a 		ENST00000408826 (MIR1273A-201) 100023982-100024084 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006JM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014313-ENSMUSG00000037627 CGP 10090 15:35925886-36140400
GeneTranscriptPositionBiotype
ENSMUSG00000014313 (Cox6c)
cytochrome c oxidase subunit VIc 		ENSMUST00000014457 (Cox6c-001) 35931976-35938246 protein_coding
ENSMUST00000127999 (Cox6c-002) 35931983-35938207 retained_intron
ENSMUST00000153512 (Cox6c-004) 35931980-35937645 protein_coding
ENSMUST00000155638 (Cox6c-005) 35925886-35935331 nonsense_mediated_decay
ENSMUST00000156915 (Cox6c-003) 35935387-35938009 protein_coding
ENSMUSG00000037646 (Vps13b)
vacuolar protein sorting 13B (yeast) 		ENSMUST00000048646 (Vps13b-201) 35371546-35931228 protein_coding
ENSMUSG00000088786 (Gm25372)
predicted gene, 25372 		ENSMUST00000158161 (Gm25372-201) 36028898-36029152 misc_RNA
ENSMUSG00000092230 (Gm18889)
predicted gene, 18889 		ENSMUST00000174284 (Gm18889-001) 36119998-36120926 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JM_0001ENSG00000132554ENST00000360863ENST00000517769ENST00000517828ENST00000517843ENST00000518474ENST00000519421ENST00000519725ENST00000520923ENST00000523287ENST00000523437ENST00000617334ENSG00000164919ENST00000297564ENST00000517682ENST00000518171ENST00000520271ENST00000520517ENST00000522934ENSG00000221753ENST00000408826CIL_0006JM_0002ENSMUSG00000014313ENSMUST00000014457ENSMUSG00000037646ENSMUST00000048646ENSMUSG00000088786ENSMUST00000158161ENSMUSG00000092230ENSMUST00000174284
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132554 ENST00000360863 N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A 0.984±0.00 N/A 0.296±0.00 N/A 2.820±0.00
ENST00000517769 N/A N/A N/A 0.239±0.00 1.091±0.00 N/A N/A N/A N/A 1.002±0.11 N/A 0.476±0.24 0.425±0.19 13.069±0.00
ENST00000517828 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A 0.196±0.00 N/A
ENST00000517843 N/A 0.151±0.00 N/A N/A 1.220±0.00 0.220±0.00 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518474 N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519421 N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A
ENST00000519725 N/A N/A N/A 0.619±0.00 N/A N/A 0.022±0.01 N/A N/A N/A 0.075±0.00 N/A N/A N/A
ENST00000520117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520923 N/A N/A N/A 0.473±0.00 0.394±0.00 N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A
ENST00000522064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523287 0.260±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A
ENST00000523437 0.136±0.00 N/A N/A 0.474±0.00 0.272±0.00 N/A N/A N/A N/A 0.370±0.00 N/A N/A 0.116±0.07 11.465±3.59
ENST00000523600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.264±0.00 N/A N/A
ENSG00000164919 ENST00000297564 N/A N/A N/A N/A N/A N/A 163.040±0.00 N/A 24.121±0.00 44.945±0.00 46.967±0.00 N/A N/A N/A
ENST00000517682 29.336±0.00 55.493±0.00 29.183±0.00 193.626±36.26 60.370±11.41 152.409±52.28 153.811±60.63 133.157±23.37 78.454±23.11 53.482±30.51 157.465±124.84 147.813±89.09 123.296±16.91 68.323±29.57
ENST00000518171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 176.703±0.00 95.168±0.00 85.282±0.00
ENST00000520271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 65.820±0.00 N/A N/A
ENST00000520468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520517 21.416±0.00 N/A 15.497±0.00 57.090±0.00 22.059±0.00 N/A N/A N/A N/A 48.509±0.00 N/A 33.985±0.00 N/A 17.963±0.00
ENST00000522934 N/A 46.758±0.00 N/A 235.993±0.00 41.986±0.00 52.697±0.00 72.214±32.25 55.841±0.00 31.213±17.80 N/A 50.259±40.54 76.657±6.12 16.402±0.00 36.904±0.00
ENST00000522940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221753 ENST00000408826 0.816±0.00 2.299±0.00 N/A 0.954±0.00 1.531±0.00 0.274±0.00 1.118±0.00 N/A 1.989±0.00 N/A N/A N/A N/A 0.266±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014313 ENSMUST00000014457 227.119±24.48 223.386±15.93 827.626±36.19 264.436±79.53 200.455±92.71 401.439±86.96 1407.642±314.46 1081.686±284.50 447.465±111.97 198.097±12.56 794.589±62.32 241.189±159.56 285.812±77.07 318.853±82.35
ENSMUST00000127999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037646 ENSMUST00000048646 5.963±2.26 4.532±0.63 3.726±0.00 2.690±0.26 3.435±0.22 5.015±1.29 N/A 4.585±0.35 2.906±0.32 4.305±0.80 N/A 4.210±1.30 2.605±0.85 4.090±1.12
ENSMUSG00000088786 ENSMUST00000158161 N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.399±0.00 N/A 2.347±1.59
ENSMUSG00000092230 ENSMUST00000174284 0.048±0.00 N/A 0.024±0.01 0.023±0.01 N/A N/A N/A N/A 0.021±0.00 0.065±0.01 N/A 0.116±0.06 0.049±0.00 0.494±0.27

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