C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c oxidase subunit VIc
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014457 Cox6c-001 ENSMUSG00000014313 10090 - 15:35931976-35938246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014457 227.119±24.48 223.386±15.93 827.626±36.19 264.436±79.53 200.455±92.71 401.439±86.96 1407.642±314.46 1081.686±284.50 447.465±111.97 198.097±12.56 794.589±62.32 241.189±159.56 285.812±77.07 318.853±82.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0002 CGP 15:35296098-35931228
CIL_0006JN CIL_0006JN_0002 CGP 15:35371546-35938246
CIL_0008YK CIL_0008YK_0002 VISTA 15:35447988-36049219
CIL_0006JM CIL_0006JM_0002 CGP 15:35925886-36140400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004129 IEA cytochrome-c oxidase activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297564 COX6C-003 protein_coding Homo_sapiens 0 237
ENST00000401679 RP11-129H15.1-001 processed_pseudogene Homo_sapiens 9e-27 122
ENST00000416832 COX6CP10-001 processed_pseudogene Homo_sapiens 1.96182e-44 182
ENST00000437445 RP3-461P17.6-001 processed_pseudogene Homo_sapiens 1e-26 122
ENST00000444980 COX6CP2-001 processed_pseudogene Homo_sapiens 2e-39 165
ENST00000490840 COX6CP6-001 processed_pseudogene Homo_sapiens 0 189
ENST00000517682 COX6C-005 protein_coding Homo_sapiens 0 237
ENST00000518171 COX6C-002 protein_coding Homo_sapiens 0 191
ENST00000520271 COX6C-007 protein_coding Homo_sapiens 0 237
ENST00000520468 COX6C-001 protein_coding Homo_sapiens 0 237
ENST00000520517 COX6C-009 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000522934 COX6C-010 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000522940 COX6C-006 protein_coding Homo_sapiens 0 237
ENST00000523016 COX6C-004 protein_coding Homo_sapiens 0 191
ENST00000524245 COX6C-008 protein_coding Homo_sapiens 0 237
ENST00000555293 COX6CP11-001 processed_pseudogene Homo_sapiens 8e-38 159
ENST00000603667 COX6CP16-001 processed_pseudogene Homo_sapiens 4e-35 150
ENST00000605137 RP11-290D2.5-001 processed_pseudogene Homo_sapiens 2e-39 165

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