C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000820_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs712 VISTA 9606 4:83478858-84080112
GeneTranscriptPositionBiotype
ENSG00000138678 (AGPAT9)
1-acylglycerol-3-phosphate O-acyltransferase 9 		ENST00000264409 (AGPAT9-002) 83536411-83605875 protein_coding
ENST00000395226 (AGPAT9-001) 83536108-83605875 protein_coding
ENST00000506766 (AGPAT9-007) 83535975-83544613 processed_transcript
ENST00000509044 (AGPAT9-004) 83598529-83605139 processed_transcript
ENST00000509412 (AGPAT9-005) 83536307-83544603 processed_transcript
ENST00000513683 (AGPAT9-003) 83588258-83595335 retained_intron
ENST00000514309 (AGPAT9-006) 83535914-83544613 processed_transcript
ENST00000611707 (AGPAT9-201) 83535914-83605872 protein_coding
ENSG00000163322 (FAM175A)
family with sequence similarity 175, member A 		ENST00000321945 (FAM175A-001) 83459517-83485181 protein_coding
ENST00000475656 (FAM175A-002) 83460945-83485103 nonsense_mediated_decay
ENST00000503217 (FAM175A-006) 83470274-83485100 protein_coding
ENST00000504777 (FAM175A-003) 83462075-83469901 retained_intron
ENST00000505489 (FAM175A-008) 83467454-83523348 protein_coding
ENST00000506553 (FAM175A-009) 83462009-83485555 protein_coding
ENST00000511801 (FAM175A-005) 83470203-83485103 nonsense_mediated_decay
ENST00000515303 (FAM175A-004) 83478808-83485065 protein_coding
ENST00000611288 (FAM175A-010) 83463723-83470333 protein_coding
ENSG00000239525 (RPL30P5)
ribosomal protein L30 pseudogene 5 		ENST00000494923 (RPL30P5-001) 83502699-83503034 processed_pseudogene
ENSG00000249171 (RP11-767N15.1)
 ENST00000510169 (RP11-767N15.1-001) 83668510-83731755 lincRNA
ENSG00000250546 (RP11-8L2.1)
 ENST00000508406 (RP11-8L2.1-001) 83968082-84293412 lincRNA
ENST00000510016 (RP11-8L2.1-003) 84147733-84149288 antisense
ENST00000513489 (RP11-8L2.1-002) 83796436-84284327 lincRNA
CIL_000820_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs712 VISTA 10090 5:100731954-101333223
GeneTranscriptPositionBiotype
ENSMUSG00000016833 (Mrps18c)
mitochondrial ribosomal protein S18C 		ENSMUST00000016977 (Mrps18c-001) 100798627-100804471 protein_coding
ENSMUST00000112898 (Mrps18c-004) 100798737-100804461 protein_coding
ENSMUST00000112901 (Mrps18c-002) 100798747-100804471 protein_coding
ENSMUST00000140296 (Mrps18c-003) 100798743-100799689 retained_intron
ENSMUST00000143477 (Mrps18c-005) 100803910-100804469 retained_intron
ENSMUSG00000029314 (Agpat9)
1-acylglycerol-3-phosphate O-acyltransferase 9 		ENSMUST00000031255 (Agpat9-002) 100846219-100899099 protein_coding
ENSMUST00000092990 (Agpat9-003) 100846364-100899102 protein_coding
ENSMUST00000112887 (Agpat9-001) 100846130-100899099 protein_coding
ENSMUST00000144623 (Agpat9-004) 100845713-100846810 protein_coding
ENSMUST00000145612 (Agpat9-005) 100846417-100846850 protein_coding
ENSMUSG00000035266 (Helq)
helicase, POLQ-like 		ENSMUST00000044684 (Helq-001) 100762145-100798598 protein_coding
ENSMUST00000133845 (Helq-003) 100762447-100798468 protein_coding
ENSMUST00000135102 (Helq-007) 100771548-100774120 retained_intron
ENSMUST00000138417 (Helq-009) 100762456-100766813 retained_intron
ENSMUST00000139203 (Helq-010) 100762151-100765438 retained_intron
ENSMUST00000144948 (Helq-005) 100791772-100793052 retained_intron
ENSMUST00000151201 (Helq-002) 100783180-100798577 nonsense_mediated_decay
ENSMUST00000152554 (Helq-006) 100778385-100783000 retained_intron
ENSMUST00000155362 (Helq-008) 100766737-100774036 nonsense_mediated_decay
ENSMUSG00000077354 (Gm26286)
predicted gene, 26286 		ENSMUST00000104166 (Gm26286-201) 100831281-100831414 snoRNA
ENSMUSG00000087611 (4930458D05Rik)
RIKEN cDNA 4930458D05 gene 		ENSMUST00000142871 (4930458D05Rik-001) 100840797-100847167 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000820_0001ENSG00000138678ENST00000264409ENST00000395226ENST00000506766ENST00000509044ENST00000509412ENST00000513683ENST00000514309ENST00000611707ENSG00000163322ENST00000321945ENST00000475656ENST00000503217ENST00000504777ENST00000505489ENST00000506553ENST00000511801ENST00000515303ENST00000611288ENSG00000239525ENST00000494923ENSG00000249171ENST00000510169ENSG00000250546ENST00000508406ENST00000510016ENST00000513489CIL_000820_0002ENSMUSG00000016833ENSMUST00000016977ENSMUST00000112898ENSMUST00000112901ENSMUST00000140296ENSMUST00000143477ENSMUSG00000029314ENSMUST00000031255ENSMUST00000092990ENSMUST00000112887ENSMUST00000144623ENSMUST00000145612ENSMUSG00000035266ENSMUST00000044684ENSMUST00000133845ENSMUST00000135102ENSMUST00000138417ENSMUST00000139203ENSMUST00000144948ENSMUST00000151201ENSMUST00000152554ENSMUST00000155362ENSMUSG00000077354ENSMUST00000104166ENSMUSG00000087611ENSMUST00000142871
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000820_0001ENSG00000138678ENST00000264409ENST00000395226ENST00000513683ENST00000611707ENSG00000163322ENST00000321945ENST00000475656ENST00000506553ENSG00000239525ENST00000494923ENSG00000249171ENST00000510169ENSG00000250546ENST00000508406ENST00000513489CIL_000820_0002ENSMUSG00000016833ENSMUST00000016977ENSMUST00000112898ENSMUST00000112901ENSMUST00000140296ENSMUST00000143477ENSMUSG00000029314ENSMUST00000031255ENSMUST00000092990ENSMUST00000112887ENSMUST00000144623ENSMUSG00000035266ENSMUST00000044684ENSMUST00000133845ENSMUST00000135102ENSMUST00000138417ENSMUST00000139203ENSMUST00000151201ENSMUST00000155362ENSMUSG00000077354ENSMUST00000104166ENSMUSG00000087611ENSMUST00000142871
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138678 ENST00000264409 2.880±0.00 N/A 9.005±0.00 N/A N/A 4.509±2.93 4.652±3.17 0.970±0.73 0.418±0.00 N/A 5.194±1.40 1.548±0.63 N/A N/A
ENST00000395226 3.132±0.00 N/A 7.588±0.00 1.083±0.42 2.378±0.46 2.086±0.00 7.497±0.25 6.082±0.00 1.095±0.00 1.669±0.06 15.320±0.00 1.954±0.91 0.598±0.12 8.791±6.62
ENST00000506766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513683 N/A N/A N/A N/A N/A N/A N/A 1.570±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611707 N/A 0.964±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.300±0.00 0.301±0.00 1.958±0.00
ENSG00000163322 ENST00000321945 1.650±0.00 N/A 0.889±0.00 N/A 0.825±0.00 N/A 0.906±0.00 0.604±0.19 N/A 0.588±0.00 1.988±0.00 2.868±0.09 N/A 2.321±0.00
ENST00000475656 4.588±0.00 3.692±0.00 N/A 1.687±0.00 3.023±0.02 2.911±1.20 1.411±0.50 1.475±1.08 N/A 2.051±0.12 3.468±2.74 4.063±2.48 1.363±0.05 7.234±1.22
ENST00000503217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506553 N/A N/A N/A N/A N/A 0.983±0.00 N/A N/A 1.628±0.00 N/A N/A 1.399±0.00 1.224±0.00 10.721±0.00
ENST00000511801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239525 ENST00000494923 N/A N/A N/A 0.084±0.00 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00
ENSG00000249171 ENST00000510169 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 0.030±0.00
ENSG00000250546 ENST00000508406 N/A N/A N/A 0.003±0.00 N/A 0.042±0.00 0.006±0.00 N/A N/A 0.005±0.00 N/A N/A N/A 0.015±0.01
ENST00000510016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016833 ENSMUST00000016977 7.103±1.00 3.093±1.43 23.579±1.34 22.893±9.20 6.530±0.93 3.253±1.63 10.392±1.62 9.470±4.27 24.073±22.27 5.989±1.62 30.419±2.00 17.192±17.53 34.416±13.40 11.062±3.38
ENSMUST00000112898 4.188±0.00 7.157±3.38 N/A N/A N/A 8.934±2.88 7.031±3.03 15.776±2.61 22.621±2.70 5.521±1.54 N/A 3.025±1.38 N/A 8.027±3.27
ENSMUST00000112901 1.104±0.29 2.449±1.26 N/A N/A 7.661±0.00 2.400±0.43 N/A N/A N/A N/A N/A 2.005±1.18 N/A N/A
ENSMUST00000140296 N/A N/A N/A 15.912±0.00 5.182±0.00 19.285±0.83 N/A 58.663±0.00 40.158±3.43 N/A N/A 15.249±6.74 N/A N/A
ENSMUST00000143477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.714±4.01 47.144±0.00 N/A
ENSMUSG00000029314 ENSMUST00000031255 18.937±6.42 2.478±1.56 2.451±0.53 0.077±0.02 11.827±2.24 2.209±0.46 2.614±0.61 6.240±1.29 2.423±1.96 1.033±0.07 0.522±0.26 2.648±1.52 6.657±3.93 5.368±2.61
ENSMUST00000092990 4.980±1.53 1.143±0.45 0.805±0.13 0.131±0.08 2.936±0.61 0.911±0.17 0.995±0.19 1.475±0.33 0.765±0.39 0.513±0.18 0.439±0.10 1.020±0.54 3.540±0.90 5.442±1.99
ENSMUST00000112887 N/A 1.956±0.86 N/A N/A N/A 0.451±0.08 N/A N/A 0.184±0.00 N/A 0.391±0.00 0.652±0.07 N/A 4.223±1.73
ENSMUST00000144623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.703±0.00 N/A N/A N/A
ENSMUST00000145612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035266 ENSMUST00000044684 0.952±0.08 0.456±0.06 1.527±0.06 2.554±1.06 0.665±0.17 0.856±0.11 0.381±0.11 0.915±0.23 2.270±1.94 0.596±0.14 0.430±0.11 1.018±0.34 2.384±1.12 0.973±0.45
ENSMUST00000133845 N/A N/A N/A 0.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135102 N/A N/A N/A 4.120±0.00 N/A N/A N/A N/A N/A N/A N/A 5.381±0.00 5.126±3.38 1.689±0.00
ENSMUST00000138417 N/A N/A N/A 4.958±0.00 N/A N/A N/A 2.952±0.45 1.150±0.00 N/A N/A N/A N/A 2.830±0.00
ENSMUST00000139203 N/A N/A 1.504±0.00 N/A N/A N/A 0.417±0.00 1.090±0.00 0.676±0.46 N/A 0.610±0.00 N/A N/A N/A
ENSMUST00000144948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151201 N/A 1.064±0.40 N/A 1.303±0.00 1.265±0.02 1.477±0.49 N/A 0.658±0.00 0.352±0.18 N/A N/A 2.133±0.31 2.712±1.73 N/A
ENSMUST00000152554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155362 N/A 1.172±0.14 N/A N/A N/A 1.368±0.00 N/A N/A 0.272±0.00 N/A N/A 1.545±0.00 N/A N/A
ENSMUSG00000077354 ENSMUST00000104166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.689±0.00 N/A N/A
ENSMUSG00000087611 ENSMUST00000142871 N/A N/A 1.224±0.04 0.031±0.01 N/A 0.281±0.02 N/A 0.595±0.01 N/A 0.176±0.00 0.176±0.06 0.204±0.00 N/A 4.793±0.88

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