C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histidyl-tRNA synthetase 2, mitochondrial (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019143 Hars2 10090 + 18:36783008-36792562 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019287 Hars2-002 36783231-36791694 protein_coding
  ENSMUST00000124204 Hars2-007 36790013-36791453 retained_intron
  ENSMUST00000131952 Hars2-005 36787014-36788262 retained_intron
  ENSMUST00000134122 Hars2-003 36783008-36790618 processed_transcript
  ENSMUST00000145876 Hars2-004 36783269-36786458 retained_intron
  ENSMUST00000152954 Hars2-001 36783008-36792562 protein_coding
  ENSMUST00000155842 Hars2-006 36787820-36790159 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019287ENSMUST00000134122ENSMUST00000145876ENSMUST00000152954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019287 4.289±0.65 6.025±0.00 5.194±0.00 5.794±0.00 4.213±1.42 3.062±0.41 3.033±0.47 4.423±0.91 2.979±0.30 4.408±0.62 2.679±0.32 5.346±1.33 N/A 1.967±0.00
ENSMUST00000134122 N/A 7.381±0.93 N/A N/A 8.872±1.52 8.396±2.87 N/A N/A N/A N/A N/A 10.451±3.53 N/A N/A
ENSMUST00000145876 N/A 30.171±3.37 N/A N/A N/A 10.327±0.48 N/A N/A 7.958±1.31 N/A N/A 19.328±5.08 N/A N/A
ENSMUST00000152954 3.979±0.98 3.193±0.43 7.074±0.45 6.990±0.18 2.591±0.39 2.849±0.38 2.568±0.57 4.234±0.63 4.583±0.89 3.750±0.32 2.818±0.51 5.298±2.21 7.544±1.89 1.699±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZJ CIL_0006ZJ_0002 CGP 18:36763671-36783205
CIL_0006ZR CIL_0006ZR_0002 CGP 18:36766530-36792562
CIL_0006ZQ CIL_0006ZQ_0002 CGP 18:36783008-36799660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004821 IEA histidine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006427 IEA histidyl-tRNA aminoacylation
GO:0008152 IEA metabolic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003693 hars histidyl-tRNA synthetase protein_coding Danio_rerio
ENSG00000112855 HARS2 histidyl-tRNA synthetase 2, mitochondrial protein_coding Homo_sapiens

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