C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000256453-ENSG00000170445 CGP 9606 5:140670794-140692024
GeneTranscriptPositionBiotype
ENSG00000112855 (HARS2)
histidyl-tRNA synthetase 2, mitochondrial 		ENST00000230771 (HARS2-001) 140691426-140699291 protein_coding
ENST00000448069 (HARS2-004) 140691614-140698938 protein_coding
ENST00000502303 (HARS2-005) 140691468-140695568 processed_transcript
ENST00000503873 (HARS2-008) 140691458-140694213 protein_coding
ENST00000506318 (HARS2-007) 140691563-140693987 retained_intron
ENST00000508522 (HARS2-003) 140691609-140698628 protein_coding
ENST00000509299 (HARS2-009) 140691453-140695634 protein_coding
ENST00000510104 (HARS2-002) 140691431-140696344 nonsense_mediated_decay
ENST00000511913 (HARS2-006) 140691455-140694291 retained_intron
ENST00000513688 (HARS2-011) 140693476-140696156 retained_intron
ENST00000513912 (HARS2-010) 140691514-140693803 retained_intron
ENST00000520095 (HARS2-012) 140691430-140695770 nonsense_mediated_decay
ENSG00000120314 (WDR55)
WD repeat domain 55 		ENST00000358337 (WDR55-001) 140664676-140672345 protein_coding
ENST00000504897 (WDR55-004) 140668234-140674124 nonsense_mediated_decay
ENST00000506393 (WDR55-003) 140664868-140672344 nonsense_mediated_decay
ENST00000511232 (WDR55-002) 140666575-140672344 retained_intron
ENST00000520764 (WDR55-006) 140668921-140672366 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0006ZJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044595-ENSMUSG00000001380 CGP 10090 18:36763671-36783205
GeneTranscriptPositionBiotype
ENSMUSG00000001380 (Hars)
histidyl-tRNA synthetase 		ENSMUST00000001416 (Hars-201) 36766530-36783205 protein_coding
ENSMUSG00000019143 (Hars2)
histidyl-tRNA synthetase 2, mitochondrial (putative) 		ENSMUST00000019287 (Hars2-002) 36783231-36791694 protein_coding
ENSMUST00000124204 (Hars2-007) 36790013-36791453 retained_intron
ENSMUST00000131952 (Hars2-005) 36787014-36788262 retained_intron
ENSMUST00000134122 (Hars2-003) 36783008-36790618 processed_transcript
ENSMUST00000145876 (Hars2-004) 36783269-36786458 retained_intron
ENSMUST00000152954 (Hars2-001) 36783008-36792562 protein_coding
ENSMUST00000155842 (Hars2-006) 36787820-36790159 retained_intron
ENSMUSG00000042660 (Wdr55)
WD repeat domain 55 		ENSMUST00000049323 (Wdr55-201) 36760239-36763708 protein_coding
ENSMUSG00000044595 (Dnd1)
dead end homolog 1 (zebrafish) 		ENSMUST00000061522 (Dnd1-001) 36763673-36766198 protein_coding
ENSMUST00000124038 (Dnd1-003) 36763675-36766198 retained_intron
ENSMUST00000155827 (Dnd1-002) 36763671-36766214 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZJ_0001ENSG00000112855ENST00000230771ENST00000448069ENST00000502303ENST00000503873ENST00000506318ENST00000508522ENST00000509299ENST00000510104ENST00000511913ENST00000513688ENST00000513912ENST00000520095ENSG00000120314ENST00000358337ENST00000504897ENST00000506393ENST00000511232ENST00000520764CIL_0006ZJ_0002ENSMUSG00000001380ENSMUST00000001416ENSMUSG00000019143ENSMUST00000019287ENSMUST00000124204ENSMUST00000131952ENSMUST00000134122ENSMUST00000145876ENSMUST00000152954ENSMUST00000155842ENSMUSG00000042660ENSMUST00000049323ENSMUSG00000044595ENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZJ_0001ENSG00000112855ENST00000230771ENSG00000120314ENST00000358337CIL_0006ZJ_0002ENSMUSG00000001380ENSMUST00000001416ENSMUSG00000019143ENSMUST00000019287ENSMUST00000134122ENSMUST00000145876ENSMUST00000152954ENSMUSG00000042660ENSMUST00000049323ENSMUSG00000044595ENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112855 ENST00000230771 N/A 21.714±0.00 4.261±0.00 N/A N/A 4.882±0.00 5.238±3.00 18.666±0.00 3.104±0.00 2.798±0.00 6.446±2.00 13.807±6.50 17.595±9.93 17.545±5.24
ENST00000448069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120314 ENST00000358337 10.649±0.00 N/A N/A N/A 2.230±0.00 N/A N/A N/A 5.177±0.00 1.917±0.00 N/A N/A 5.883±0.55 N/A
ENST00000504897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001380 ENSMUST00000001416 16.709±2.13 11.846±1.01 21.850±0.08 37.906±17.64 10.780±4.77 8.696±1.34 9.990±0.53 13.541±1.47 29.932±23.46 14.204±1.52 11.345±0.49 20.071±9.58 38.634±16.18 8.814±1.71
ENSMUSG00000019143 ENSMUST00000019287 4.289±0.65 6.025±0.00 5.194±0.00 5.794±0.00 4.213±1.42 3.062±0.41 3.033±0.47 4.423±0.91 2.979±0.30 4.408±0.62 2.679±0.32 5.346±1.33 N/A 1.967±0.00
ENSMUST00000124204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134122 N/A 7.381±0.93 N/A N/A 8.872±1.52 8.396±2.87 N/A N/A N/A N/A N/A 10.451±3.53 N/A N/A
ENSMUST00000145876 N/A 30.171±3.37 N/A N/A N/A 10.327±0.48 N/A N/A 7.958±1.31 N/A N/A 19.328±5.08 N/A N/A
ENSMUST00000152954 3.979±0.98 3.193±0.43 7.074±0.45 6.990±0.18 2.591±0.39 2.849±0.38 2.568±0.57 4.234±0.63 4.583±0.89 3.750±0.32 2.818±0.51 5.298±2.21 7.544±1.89 1.699±0.33
ENSMUST00000155842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042660 ENSMUST00000049323 10.037±3.41 8.188±0.95 12.805±0.23 11.023±3.49 6.648±1.64 7.038±1.52 4.468±0.42 14.264±1.80 21.715±18.86 6.511±0.44 8.088±0.39 12.177±3.99 13.374±5.95 5.345±1.38
ENSMUSG00000044595 ENSMUST00000061522 N/A 10.082±1.79 N/A 2.047±0.38 1.346±0.22 1.232±0.20 1.818±0.42 N/A 0.719±0.24 1.283±0.25 N/A 6.143±1.31 N/A 1.112±0.05
ENSMUST00000124038 N/A N/A N/A N/A N/A 0.972±0.00 N/A N/A N/A N/A N/A 1.431±0.00 N/A N/A
ENSMUST00000155827 N/A N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A 0.557±0.00 N/A 1.467±0.00 N/A 1.884±1.00

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