C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC63-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019802 Sec63 10090 + 10:42761496-42832514 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019937 Sec63-001 42761496-42832514 protein_coding
  ENSMUST00000105496 Sec63-005 42817928-42829283 processed_transcript
  ENSMUST00000124613 Sec63-004 42817928-42829280 processed_transcript
  ENSMUST00000144228 Sec63-003 42761806-42812742 retained_intron
  ENSMUST00000155410 Sec63-002 42761615-42830392 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019937ENSMUST00000124613ENSMUST00000155410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019937 5.829±1.03 4.983±1.24 16.874±0.85 12.022±4.67 3.314±0.72 3.657±1.42 3.544±0.26 6.484±1.02 9.353±1.84 8.889±1.51 4.719±0.23 7.171±5.38 12.356±2.12 4.234±0.75
ENSMUST00000124613 N/A N/A N/A 67.249±0.00 N/A N/A N/A N/A 14.551±0.00 N/A N/A 179.914±0.00 83.048±67.71 54.505±89.12
ENSMUST00000155410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.534±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BP CIL_0009BP_0002 VISTA 10:42334080-42935172
CIL_0008G4 CIL_0008G4_0002 VISTA 10:42335863-42936982
CIL_0007KA CIL_0007KA_0003 UCNEbase 10:42339928-43024116
CIL_0006OL CIL_0006OL_0002 CGP 10:42761496-42960780

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IGI liver development
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006614 IMP SRP-dependent cotranslational protein targeting to membrane
GO:0006620 IMP posttranslational protein targeting to membrane
GO:0006807 IGI nitrogen compound metabolic process
GO:0008565 IEA protein transporter activity
GO:0010259 IMP multicellular organismal aging
GO:0016020 ISO membrane
GO:0016021 IEA integral component of membrane
GO:0031204 IEA posttranslational protein targeting to membrane, translocation
GO:0044822 IEA poly(A) RNA binding
GO:0072001 IGI renal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017740 sec63 SEC63-like (S. cerevisiae) protein_coding Danio_rerio
ENSG00000025796 SEC63 SEC63 homolog (S. cerevisiae) protein_coding Homo_sapiens

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