C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB36, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020175 Rab36 10090 + 10:75037058-75054748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020391 Rab36-002 75037084-75054103 protein_coding
  ENSMUST00000122815 Rab36-006 75037273-75046094 retained_intron
  ENSMUST00000136944 Rab36-003 75037058-75048788 retained_intron
  ENSMUST00000139384 Rab36-007 75037322-75050695 protein_coding
  ENSMUST00000142507 Rab36-004 75037226-75047572 retained_intron
  ENSMUST00000146440 Rab36-005 75037836-75054061 protein_coding
  ENSMUST00000147802 Rab36-001 75037066-75054748 protein_coding
  ENSMUST00000151432 Rab36-008 75038223-75050690 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020391ENSMUST00000136944ENSMUST00000139384ENSMUST00000142507ENSMUST00000146440ENSMUST00000147802ENSMUST00000151432
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020391 1.406±0.73 4.467±1.66 N/A 3.300±1.59 0.604±0.28 0.667±0.00 0.378±0.10 0.905±0.20 0.561±0.00 1.006±0.05 0.075±0.01 2.833±0.79 0.199±0.02 3.238±1.38
ENSMUST00000136944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A N/A
ENSMUST00000139384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A
ENSMUST00000142507 0.951±0.55 2.968±0.75 0.756±0.15 1.627±0.28 0.460±0.06 0.383±0.14 0.137±0.03 0.560±0.03 0.378±0.11 1.124±0.00 0.045±0.02 2.808±0.91 0.119±0.01 1.775±0.37
ENSMUST00000146440 0.894±0.43 3.384±0.35 0.896±0.01 2.287±0.27 0.573±0.02 0.486±0.02 0.232±0.00 0.788±0.12 0.496±0.23 1.699±0.36 0.098±0.05 3.418±0.88 0.280±0.12 2.006±0.29
ENSMUST00000147802 0.134±0.00 3.236±0.92 0.751±0.01 2.258±0.94 0.481±0.11 0.405±0.10 N/A 1.277±0.62 0.623±0.33 1.263±0.27 0.079±0.02 2.459±0.39 0.192±0.06 2.431±0.49
ENSMUST00000151432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RX CIL_0002RX_0002 CGP 10:74967177-75054748
CIL_0002X0 CIL_0002X0_0002 CGP 10:75037058-75184923

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014058 rab36 RAB36, member RAS oncogene family protein_coding Danio_rerio
ENSG00000100228 RAB36 RAB36, member RAS oncogene family protein_coding Homo_sapiens

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