C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB36, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146440 Rab36-005 ENSMUSG00000020175 10090 + 10:75037836-75054061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146440 0.894±0.43 3.384±0.35 0.896±0.01 2.287±0.27 0.573±0.02 0.486±0.02 0.232±0.00 0.788±0.12 0.496±0.23 1.699±0.36 0.098±0.05 3.418±0.88 0.280±0.12 2.006±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RX CIL_0002RX_0002 CGP 10:74967177-75054748
CIL_0002X0 CIL_0002X0_0002 CGP 10:75037058-75184923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141382 rab34b-001 protein_coding Danio_rerio 0.0000000005 71
ENSDART00000004740 rab34b-201 protein_coding Danio_rerio 0.00001 57
ENST00000263116 RAB36-001 protein_coding Homo_sapiens 0 832
ENST00000341989 RAB36-002 protein_coding Homo_sapiens 0 569

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