C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB36, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147802 Rab36-001 ENSMUSG00000020175 10090 + 10:75037066-75054748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147802 0.134±0.00 3.236±0.92 0.751±0.01 2.258±0.94 0.481±0.11 0.405±0.10 1.277±0.62 0.623±0.33 1.263±0.27 0.079±0.02 2.459±0.39 0.192±0.06 2.431±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RX CIL_0002RX_0002 CGP 10:74967177-75054748
CIL_0002X0 CIL_0002X0_0002 CGP 10:75037058-75184923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141382 rab34b-001 protein_coding Danio_rerio 0.0000000006 71
ENSDART00000004740 rab34b-201 protein_coding Danio_rerio 0.00002 57
ENST00000263116 RAB36-001 protein_coding Homo_sapiens 0 832
ENST00000341989 RAB36-002 protein_coding Homo_sapiens 0 569

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