C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128266-ENSG00000100228 CGP 9606 22:23070361-23164350
GeneTranscriptPositionBiotype
ENSG00000100218 (RTDR1)
radial spoke head 14 homolog (Chlamydomonas) 		ENST00000216036 (RTDR1-001) 23059415-23142093 protein_coding
ENST00000406876 (RTDR1-002) 23136198-23145021 protein_coding
ENST00000421213 (RTDR1-004) 23124227-23134074 protein_coding
ENST00000439064 (RTDR1-005) 23131177-23138914 protein_coding
ENST00000452757 (RTDR1-003) 23135993-23140300 protein_coding
ENSG00000100228 (RAB36)
RAB36, member RAS oncogene family 		ENST00000263116 (RAB36-001) 23145326-23164350 protein_coding
ENST00000341989 (RAB36-002) 23145366-23161564 protein_coding
ENST00000420895 (RAB36-003) 23150113-23156311 protein_coding
ENSG00000128266 (GNAZ)
guanine nucleotide binding protein (G protein), alpha z polypeptide 		ENST00000479571 (GNAZ-002) 23122378-23123342 processed_transcript
ENST00000492538 (GNAZ-003) 23070574-23095716 processed_transcript
ENST00000615612 (GNAZ-001) 23070361-23125037 protein_coding
ENSG00000221069 (AC000029.1)
 ENST00000408142 (AC000029.1-201) 23136620-23136710 miRNA
ENSG00000272019 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000606537 (Metazoa_SRP.1-227) 23132730-23133005 misc_RNA
CIL_0002RX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040009-ENSMUSG00000020175 CGP 10090 10:74967177-75054748
GeneTranscriptPositionBiotype
ENSMUSG00000009070 (Rtdr1)
radial spoke head homolog 14 (Chlamydomonas) 		ENSMUST00000009214 (Rtdr1-001) 74957477-75032565 protein_coding
ENSMUST00000159761 (Rtdr1-002) 75024513-75032586 retained_intron
ENSMUST00000159994 (Rtdr1-004) 75022304-75032528 protein_coding
ENSMUST00000160072 (Rtdr1-005) 74961671-75032562 protein_coding
ENSMUST00000160450 (Rtdr1-003) 74959672-75032553 protein_coding
ENSMUST00000166088 (Rtdr1-201) 74957477-75032586 protein_coding
ENSMUST00000179546 (Rtdr1-202) 74957477-75032553 protein_coding
ENSMUSG00000020175 (Rab36)
RAB36, member RAS oncogene family 		ENSMUST00000020391 (Rab36-002) 75037084-75054103 protein_coding
ENSMUST00000122815 (Rab36-006) 75037273-75046094 retained_intron
ENSMUST00000136944 (Rab36-003) 75037058-75048788 retained_intron
ENSMUST00000139384 (Rab36-007) 75037322-75050695 protein_coding
ENSMUST00000142507 (Rab36-004) 75037226-75047572 retained_intron
ENSMUST00000146440 (Rab36-005) 75037836-75054061 protein_coding
ENSMUST00000147802 (Rab36-001) 75037066-75054748 protein_coding
ENSMUST00000151432 (Rab36-008) 75038223-75050690 retained_intron
ENSMUSG00000040009 (Gnaz)
guanine nucleotide binding protein, alpha z subunit 		ENSMUST00000037813 (Gnaz-001) 74967177-75016907 protein_coding
ENSMUST00000159991 (Gnaz-002) 74990841-75016898 protein_coding
ENSMUST00000160421 (Gnaz-003) 74967209-74992044 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RX_0001ENSG00000100218ENST00000216036ENST00000406876ENST00000421213ENST00000439064ENST00000452757ENSG00000100228ENST00000263116ENST00000341989ENST00000420895ENSG00000128266ENST00000479571ENST00000492538ENST00000615612ENSG00000221069ENST00000408142ENSG00000272019ENST00000606537CIL_0002RX_0002ENSMUSG00000009070ENSMUST00000009214ENSMUST00000159761ENSMUST00000159994ENSMUST00000160072ENSMUST00000160450ENSMUST00000166088ENSMUST00000179546ENSMUSG00000020175ENSMUST00000020391ENSMUST00000122815ENSMUST00000136944ENSMUST00000139384ENSMUST00000142507ENSMUST00000146440ENSMUST00000147802ENSMUST00000151432ENSMUSG00000040009ENSMUST00000037813ENSMUST00000159991ENSMUST00000160421
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RX_0001ENSG00000100218ENST00000216036ENST00000406876ENST00000439064ENST00000452757ENSG00000100228ENST00000263116ENST00000341989ENST00000420895ENSG00000128266ENST00000479571ENST00000615612ENSG00000221069ENST00000408142ENSG00000272019ENST00000606537CIL_0002RX_0002ENSMUSG00000009070ENSMUST00000009214ENSMUST00000159761ENSMUST00000159994ENSMUST00000160072ENSMUST00000160450ENSMUST00000166088ENSMUST00000179546ENSMUSG00000020175ENSMUST00000020391ENSMUST00000136944ENSMUST00000139384ENSMUST00000142507ENSMUST00000146440ENSMUST00000147802ENSMUST00000151432ENSMUSG00000040009ENSMUST00000037813ENSMUST00000159991ENSMUST00000160421
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100218 ENST00000216036 N/A N/A 0.319±0.00 N/A N/A N/A N/A 2.365±0.00 0.081±0.00 1.333±0.00 N/A 1.080±0.00 0.243±0.00 8.803±0.87
ENST00000406876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.688±0.00
ENST00000421213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439064 N/A N/A 0.588±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452757 N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A
ENSG00000100228 ENST00000263116 N/A 1.712±0.00 1.394±0.00 1.718±0.39 1.301±0.00 0.110±0.00 0.137±0.13 3.445±0.00 0.412±0.32 1.797±0.70 0.081±0.06 3.599±0.73 2.283±0.57 1.656±0.53
ENST00000341989 N/A N/A N/A N/A 0.804±0.00 N/A N/A N/A N/A 1.766±0.00 N/A 0.872±0.00 N/A N/A
ENST00000420895 N/A N/A N/A N/A 0.861±0.00 N/A N/A N/A N/A N/A N/A 4.064±0.00 3.597±0.00 4.699±0.00
ENSG00000128266 ENST00000479571 N/A N/A 0.519±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.548±0.00 N/A
ENST00000492538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615612 21.674±0.00 3.199±0.00 N/A 17.759±2.35 3.668±2.68 5.202±4.04 2.043±0.00 0.860±0.84 1.587±1.46 0.769±0.62 0.680±0.00 5.879±5.42 0.500±0.16 6.262±1.24
ENSG00000221069 ENST00000408142 N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272019 ENST00000606537 N/A N/A N/A 0.834±0.00 0.158±0.00 N/A N/A 0.390±0.00 N/A 0.220±0.00 N/A 0.613±0.19 N/A 0.834±0.63
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009070 ENSMUST00000009214 N/A N/A N/A 0.094±0.00 N/A N/A 0.102±0.00 N/A N/A 0.609±0.25 N/A 1.412±1.02 0.004±0.00 9.649±0.78
ENSMUST00000159761 N/A N/A N/A 0.075±0.02 N/A N/A 0.036±0.00 0.078±0.00 0.069±0.02 0.417±0.09 N/A 0.780±0.49 0.041±0.00 N/A
ENSMUST00000159994 0.016±0.00 N/A N/A N/A 0.017±0.00 N/A N/A N/A 0.023±0.02 0.264±0.01 N/A 0.631±0.07 0.005±0.00 3.954±0.45
ENSMUST00000160072 N/A 0.427±0.24 N/A 0.109±0.00 N/A 0.148±0.00 N/A N/A 0.033±0.01 1.117±0.00 N/A 2.418±1.03 N/A 11.641±1.61
ENSMUST00000160450 N/A 0.231±0.04 N/A N/A N/A N/A 0.290±0.03 N/A N/A 1.231±0.61 N/A 3.049±1.71 0.041±0.00 5.756±0.00
ENSMUST00000166088 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A 0.860±0.53 N/A 0.576±0.06 N/A 6.555±1.41
ENSMUST00000179546 N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A 0.592±0.33 N/A 3.066±0.00 N/A N/A
ENSMUSG00000020175 ENSMUST00000020391 1.406±0.73 4.467±1.66 N/A 3.300±1.59 0.604±0.28 0.667±0.00 0.378±0.10 0.905±0.20 0.561±0.00 1.006±0.05 0.075±0.01 2.833±0.79 0.199±0.02 3.238±1.38
ENSMUST00000122815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A N/A
ENSMUST00000139384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A
ENSMUST00000142507 0.951±0.55 2.968±0.75 0.756±0.15 1.627±0.28 0.460±0.06 0.383±0.14 0.137±0.03 0.560±0.03 0.378±0.11 1.124±0.00 0.045±0.02 2.808±0.91 0.119±0.01 1.775±0.37
ENSMUST00000146440 0.894±0.43 3.384±0.35 0.896±0.01 2.287±0.27 0.573±0.02 0.486±0.02 0.232±0.00 0.788±0.12 0.496±0.23 1.699±0.36 0.098±0.05 3.418±0.88 0.280±0.12 2.006±0.29
ENSMUST00000147802 0.134±0.00 3.236±0.92 0.751±0.01 2.258±0.94 0.481±0.11 0.405±0.10 N/A 1.277±0.62 0.623±0.33 1.263±0.27 0.079±0.02 2.459±0.39 0.192±0.06 2.431±0.49
ENSMUST00000151432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A
ENSMUSG00000040009 ENSMUST00000037813 1.805±0.97 1.356±0.38 4.145±0.51 8.331±1.81 0.597±0.12 0.766±0.38 0.244±0.03 1.523±0.63 1.239±0.31 0.801±0.15 N/A 1.851±0.84 2.569±1.15 0.426±0.29
ENSMUST00000159991 0.269±0.12 N/A N/A 2.623±0.00 0.347±0.03 0.491±0.17 0.201±0.01 1.386±0.34 0.038±0.02 0.603±0.23 0.059±0.02 1.048±0.65 0.682±0.12 0.308±0.19
ENSMUST00000160421 N/A 0.700±0.02 N/A N/A 0.316±0.06 0.405±0.05 0.181±0.02 N/A 0.068±0.02 N/A 0.046±0.02 1.425±0.60 N/A N/A

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