C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB36, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020391 Rab36-002 ENSMUSG00000020175 10090 + 10:75037084-75054103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020391
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020391 1.406±0.73 4.467±1.66 3.300±1.59 0.604±0.28 0.667±0.00 0.378±0.10 0.905±0.20 0.561±0.00 1.006±0.05 0.075±0.01 2.833±0.79 0.199±0.02 3.238±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RX CIL_0002RX_0002 CGP 10:74967177-75054748
CIL_0002X0 CIL_0002X0_0002 CGP 10:75037058-75184923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141382 rab34b-001 protein_coding Danio_rerio 0.0000000005 71
ENSDART00000004740 rab34b-201 protein_coding Danio_rerio 0.00001 57
ENST00000263116 RAB36-001 protein_coding Homo_sapiens 0 832
ENST00000341989 RAB36-002 protein_coding Homo_sapiens 0 569

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